Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_F01
         (892 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            26   0.53 
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   4.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.5  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   8.6  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 20/68 (29%), Positives = 33/68 (48%)
 Frame = -2

Query: 696 LFEGFHDTRRSSHQLLRIFQTRLKLLADSTVGKLCFKFKKHVLRFSVFCWKHSGPPSAMN 517
           +F   HDT+R + Q+L    ++   +A + +    F   + +  F  F  K  GPP+  N
Sbjct: 303 VFVDNHDTQRDNPQILTYKYSKRYKMAVAFMLSHPFGTPRIMSSFD-FQSKDQGPPNDGN 361

Query: 516 KAIRSPSL 493
             I SPS+
Sbjct: 362 GNILSPSI 369


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 801 TVQSVCLGQSGVARRV 754
           TVQSVC+ + G A+++
Sbjct: 28  TVQSVCMKEIGTAQQI 43


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 203 RTMLKXKSLKVEAALRTFGNCLKGLVDLNVLKTEI 307
           RTM K +  K + A+      L+ L +LN L+TE+
Sbjct: 30  RTMSKIQWRKPKPAMVEEKTQLRYLEELNALRTEL 64


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 794 CTVGLLSVNTSAITKLMNL 850
           C VG+L+V+  +I KL  +
Sbjct: 11  CLVGILAVSEESINKLRKI 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,488
Number of Sequences: 438
Number of extensions: 4572
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)