Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_E23
         (947 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   123   3e-30
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   123   3e-30
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.1  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  123 bits (296), Expect = 3e-30
 Identities = 58/75 (77%), Positives = 67/75 (89%)
 Frame = +3

Query: 291 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 470
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 471 VRIPKEQGSPFILAW 515
           VRIPKEQG  F+  W
Sbjct: 61  VRIPKEQG--FLSYW 73



 Score =  120 bits (288), Expect = 3e-29
 Identities = 55/72 (76%), Positives = 56/72 (77%)
 Frame = +1

Query: 493 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXX 672
           G LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF RYF            
Sbjct: 68  GFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGA 127

Query: 673 TSLCFVYPLDFA 708
           TSLCFVYPLDFA
Sbjct: 128 TSLCFVYPLDFA 139



 Score = 57.6 bits (133), Expect = 2e-10
 Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
 Frame = +2

Query: 719 LAADVGKGDGQREFSGS----RKLHQQD--LQVRRV*SVCTEGFXCVRARYHHLXGPHTS 880
           LAADVGK  G+REF+G      K+ + D    + R   V  +G    RA Y         
Sbjct: 143 LAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYF-------- 194

Query: 881 GFYETARGMLPXPKNTPIVISW 946
           GFY+TARGMLP PK TP +ISW
Sbjct: 195 GFYDTARGMLPDPKKTPFLISW 216


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  123 bits (296), Expect = 3e-30
 Identities = 58/75 (77%), Positives = 67/75 (89%)
 Frame = +3

Query: 291 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 470
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 471 VRIPKEQGSPFILAW 515
           VRIPKEQG  F+  W
Sbjct: 61  VRIPKEQG--FLSYW 73



 Score =  120 bits (288), Expect = 3e-29
 Identities = 55/72 (76%), Positives = 56/72 (77%)
 Frame = +1

Query: 493 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXX 672
           G LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF RYF            
Sbjct: 68  GFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGA 127

Query: 673 TSLCFVYPLDFA 708
           TSLCFVYPLDFA
Sbjct: 128 TSLCFVYPLDFA 139



 Score = 57.6 bits (133), Expect = 2e-10
 Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
 Frame = +2

Query: 719 LAADVGKGDGQREFSGS----RKLHQQD--LQVRRV*SVCTEGFXCVRARYHHLXGPHTS 880
           LAADVGK  G+REF+G      K+ + D    + R   V  +G    RA Y         
Sbjct: 143 LAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYF-------- 194

Query: 881 GFYETARGMLPXPKNTPIVISW 946
           GFY+TARGMLP PK TP +ISW
Sbjct: 195 GFYDTARGMLPDPKKTPFLISW 216


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 733 DIGGKTGYVRSQGGTRSTERWLRRHHRRPDYQ 638
           D+   TG+   Q     T+  +R H +R D+Q
Sbjct: 485 DLDAVTGHQSQQQQEEQTQSRVRAHLKRLDHQ 516


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,893
Number of Sequences: 438
Number of extensions: 4252
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31081323
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)