Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_E22
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0841 - 7873458-7874225                                           28   8.8  

>12_01_0841 - 7873458-7874225
          Length = 255

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
 Frame = -1

Query: 873 FPEG-GKXXXVSGXXQGXXRXXXGGXXQGGXAWNXYXPXRGXXTXXLGVDFXDXXQGGGA 697
           + EG G+    SG   G      GG  QGG + + Y    G      G  +     GGG 
Sbjct: 54  YGEGYGQGGGASGGGYGQGGGGGGGGGQGGGSGSGYGSGYGQGGGASGGGYGKGGGGGGG 113

Query: 696 YGKTPATRPFYG 661
            G+       YG
Sbjct: 114 GGQGGGAGSGYG 125


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,652,623
Number of Sequences: 37544
Number of extensions: 197269
Number of successful extensions: 371
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)