Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_E21
(899 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 29 0.058
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.41
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 25 0.94
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.6
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 2.2
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 24 2.2
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 24 2.2
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 3.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.8
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 22 6.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 6.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 29.1 bits (62), Expect = 0.058
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -3
Query: 135 SHVLSCVIXLILWITVLPPLSELIPLAASXIL 40
S +LS V+ L+L +LPP S ++PL A +L
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIAKYLL 301
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.2 bits (55), Expect = 0.41
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 156 GLLLAFCSHVL-SCVIXLILWITVLPPLSELIPLAASXIL 40
G ++ CS +L S + +L ++PP S IPL +L
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPLLGKYLL 317
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 25.0 bits (52), Expect = 0.94
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 135 SHVLSCVIXLILWITVLPPLSELIPLAASXIL 40
S +LS + +L ++PP S ++PL +L
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPLLGKFVL 308
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 768 KGSQXDPLIFSTGSDAQ 818
+G Q DP+IFST D++
Sbjct: 1126 EGEQKDPVIFSTSFDSK 1142
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.8 bits (49), Expect = 2.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 135 SHVLSCVIXLILWITVLPPLSELIPLAASXIL 40
S +LS + +L ++PP S +PL +L
Sbjct: 273 SILLSLTVFFLLLAEIIPPTSLTVPLLGKYLL 304
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 59 SGISSLKGGNTVIHRIRXI 115
+G+ + G NTVIH+ R I
Sbjct: 128 TGVDDILGNNTVIHQPRII 146
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 23.8 bits (49), Expect = 2.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 435 WAVCTNPPFSPTAAP 479
W V +PP+SP AP
Sbjct: 264 WDVLPHPPYSPDLAP 278
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 273 DTRRFPLEAPSCALLFRPCR 332
+ R FP++ SC L+ C+
Sbjct: 165 ELRNFPMDRQSCPLILGSCK 184
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 3.8
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = -3
Query: 135 SHVLSCVIXLILWITVLPPLSELIPLAASXIL 40
S ++S + +L + ++PP S ++PL ++
Sbjct: 281 SILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 312
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 3.8
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = -3
Query: 135 SHVLSCVIXLILWITVLPPLSELIPLAASXIL 40
S ++S + +L + ++PP S ++PL ++
Sbjct: 281 SILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 312
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.2 bits (45), Expect = 6.6
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 379 KRHASRREKGGQVSGKRQGRNRRAH 305
KR +++ +G + + +NRRAH
Sbjct: 39 KRPKTKKSQGSRTTHNELEKNRRAH 63
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 799 LRGLTLSGTKTPVKGFWS*NYQKGSSPK 882
+RGLTL G +K + + N K S P+
Sbjct: 251 IRGLTLPGAMEGLKYYVTPNLSKLSDPE 278
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 799 LRGLTLSGTKTPVKGFWS*NYQKGSSPK 882
+RGLTL G +K + + N K S P+
Sbjct: 304 IRGLTLPGAMEGLKYYVTPNLSKLSDPE 331
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,374
Number of Sequences: 438
Number of extensions: 6084
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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