Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_E19
         (934 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    34   0.002
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    34   0.002
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    34   0.002
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    31   0.020
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    31   0.020
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    29   0.046
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    29   0.046
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   4.0  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   5.2  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +1

Query: 319 RXFLEAVAEACGKCTPXQKXXCKXXLEXXKDXLPQXYXAFKXKYDPQGK 465
           R   +A+A  C KCT  Q+   K  ++   +  P+ + +   KYDP  K
Sbjct: 66  RVLPDALATDCKKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKK 114


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +1

Query: 319 RXFLEAVAEACGKCTPXQKXXCKXXLEXXKDXLPQXYXAFKXKYDPQGK 465
           R   +A+A  C KCT  Q+   K  ++   +  P+ + +   KYDP  K
Sbjct: 66  RVLPDALATDCKKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKK 114


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +1

Query: 319 RXFLEAVAEACGKCTPXQKXXCKXXLEXXKDXLPQXYXAFKXKYDPQGK 465
           R   +A+A  C KCT  Q+   K  ++   +  P+ + +   KYDP  K
Sbjct: 66  RVLPDALATDCKKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKK 114


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 0.020
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +1

Query: 319 RXFLEAVAEACGKCTPXQKXXCKXXLEXXKDXLPQXYXAFKXKYDPQG 462
           R   +A+   C  C+  QK      ++   D  P+ +   + KYDP G
Sbjct: 65  RNLPDALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKYDPTG 112


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 0.020
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +1

Query: 319 RXFLEAVAEACGKCTPXQKXXCKXXLEXXKDXLPQXYXAFKXKYDPQG 462
           R   +A+   C  C+  QK      ++   D  P+ +   + KYDP G
Sbjct: 65  RNLPDALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKYDPTG 112


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 29.5 bits (63), Expect = 0.046
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +1

Query: 331 EAVAEACGKCTPXQKXXCKXXLEXXKDXLPQXYXAFKXKYDPQGK 465
           +A++  C KC   QK      +   K   P+ +     KYD  G+
Sbjct: 66  DALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLSAKYDSTGE 110


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 29.5 bits (63), Expect = 0.046
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +1

Query: 331 EAVAEACGKCTPXQKXXCKXXLEXXKDXLPQXYXAFKXKYDPQGK 465
           +A++  C KC   QK      +   K   P+ +     KYD  G+
Sbjct: 66  DALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLSAKYDSTGE 110


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 106 WEXXCILCTPPSVXKP 59
           W+  C+ C+PP    P
Sbjct: 385 WQMSCVACSPPPRQTP 400


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 359 HLPHASATASRN 324
           H+PHAS T S N
Sbjct: 426 HIPHASVTDSEN 437


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,565
Number of Sequences: 438
Number of extensions: 2674
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30476628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)