Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_E18
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434     33   0.23 
05_01_0499 - 4166891-4166942,4167191-4167510                           33   0.40 
04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016     31   1.6  
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533...    29   3.7  
01_03_0308 - 14883728-14884120                                         29   3.7  
02_02_0272 - 8452994-8453187,8453850-8454975                           29   6.5  
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769...    28   8.6  
07_03_0723 + 20954827-20954905,20954974-20956277                       28   8.6  
03_03_0204 + 15436660-15437244,15437355-15437632,15438792-154390...    28   8.6  

>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
          Length = 418

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = -1

Query: 388 GMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMAL 272
           G   P R+SP    L+   PAEAALS  RSL S  P ++
Sbjct: 138 GEEPPRRVSPAAVVLAVLLPAEAALSFIRSLSSLAPFSI 176


>05_01_0499 - 4166891-4166942,4167191-4167510
          Length = 123

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -1

Query: 466 PLALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAA 317
           PLALR   LL N +     PS SP+   +   R  P P + + ASP+ +A
Sbjct: 9   PLALRGASLLGNAVAAAVVPSSSPEQQQQQQRRPRPPPGSKNGASPSSSA 58


>04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016
          Length = 360

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 288 ADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVNL 431
           A  N+R + S AS  +A  + + HG+ + G   P +G     AG ++L
Sbjct: 173 AGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSL 220


>08_02_0759 -
           20851828-20851932,20852190-20852285,20853231-20853314,
           20853411-20853481,20853568-20853655,20853745-20853936,
           20854044-20854931
          Length = 507

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 396 GEQLGVAGKVNLFHNNNHDLSAKGVRDQELAQRHPQRA 509
           GE   V   + L   +  DL A   + QEL++ HPQ+A
Sbjct: 108 GESAPVGAPIALLAESEDDLQAALAKAQELSKAHPQQA 145


>01_03_0308 - 14883728-14884120
          Length = 130

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 537 QSAAQRVEVGRVGDGAGRVPDRERPWRSGRGCYCGTS*PCLRR 409
           Q+  +  E+G  G  AGR P     WR  R C C +S P + R
Sbjct: 62  QTTERAPEIG--GAVAGRKPSLAELWRRHRRCSCNSSCPPIER 102


>02_02_0272 - 8452994-8453187,8453850-8454975
          Length = 439

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -1

Query: 373 VRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRG 242
           +RL P P +L RA+   A  + WR L +ADP  L  F +   RG
Sbjct: 20  LRLPPRPSSLPRAA---AVCARWRRLVTADPAFLRRFRAHHRRG 60


>12_01_0831 -
           7688342-7688772,7690678-7692610,7693142-7693915,
           7694019-7694142,7696084-7696189,7696346-7696532
          Length = 1184

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 376 PVRLSPCPFTLSRASPAEAA 317
           P+RLSP P ++SR  P+ AA
Sbjct: 153 PIRLSPSPRSMSRTRPSSAA 172


>07_03_0723 + 20954827-20954905,20954974-20956277
          Length = 460

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 403 CSPKPGMRVPVR-LSPCPFTLSRASPAEAALSLWR 302
           CSP P  R+P+R  + C     +ASP   + + WR
Sbjct: 62  CSPAPSARIPLRGFTDCRL---KASPGSGSFTRWR 93


>03_03_0204 +
           15436660-15437244,15437355-15437632,15438792-15439068,
           15439160-15439405,15440853-15441134
          Length = 555

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -1

Query: 430 KLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKS 290
           K + P+  +    P    P  ++P P    + +PA  A+  WR+ K+
Sbjct: 59  KTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKA 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,046,669
Number of Sequences: 37544
Number of extensions: 389400
Number of successful extensions: 1285
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)