BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_E13
(882 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119012-1|AAM50872.1| 132|Drosophila melanogaster LP04037p pro... 36 0.056
AE014134-656|AAF51075.1| 132|Drosophila melanogaster CG3604-PA ... 36 0.056
BT023101-1|AAY55517.1| 84|Drosophila melanogaster IP03754p pro... 34 0.30
BT023081-1|AAY55497.1| 84|Drosophila melanogaster IP03854p pro... 34 0.30
AE014134-658|AAF51073.1| 91|Drosophila melanogaster CG2816-PA ... 34 0.30
AY070702-1|AAL48173.1| 82|Drosophila melanogaster RH38008p pro... 33 0.39
AY070668-1|AAL48139.1| 82|Drosophila melanogaster RH05411p pro... 33 0.39
AE014134-655|AAF51076.1| 82|Drosophila melanogaster CG16712-PA... 33 0.39
DQ096258-1|AAZ40483.1| 78|Drosophila melanogaster ACP24A4 prot... 32 0.91
DQ096257-1|AAZ40482.1| 78|Drosophila melanogaster ACP24A4 prot... 32 0.91
DQ096256-1|AAZ40481.1| 78|Drosophila melanogaster ACP24A4 prot... 32 0.91
DQ096253-1|AAZ40478.1| 78|Drosophila melanogaster ACP24A4 prot... 32 0.91
DQ096252-1|AAZ40477.1| 78|Drosophila melanogaster ACP24A4 prot... 32 0.91
DQ096250-1|AAZ40475.1| 78|Drosophila melanogaster ACP24A4 prot... 32 0.91
BT022485-1|AAY54901.1| 78|Drosophila melanogaster IP06105p pro... 32 0.91
BT022473-1|AAY54889.1| 78|Drosophila melanogaster IP06005p pro... 32 0.91
AY060990-1|AAL28538.1| 461|Drosophila melanogaster HL01082p pro... 32 0.91
AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula... 32 0.91
AF135119-1|AAD31715.1| 763|Drosophila melanogaster fat-spondin ... 32 0.91
AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-P... 32 0.91
AE014134-653|ABI31285.1| 78|Drosophila melanogaster CG31779-PB... 32 0.91
AE013599-2411|AAM68494.2| 628|Drosophila melanogaster CG6953-PB... 32 0.91
AE013599-2409|AAF57910.1| 763|Drosophila melanogaster CG6953-PA... 32 0.91
DQ096255-1|AAZ40480.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096254-1|AAZ40479.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096251-1|AAZ40476.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096249-1|AAZ40474.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096248-1|AAZ40473.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096247-1|AAZ40472.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096246-1|AAZ40471.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096244-1|AAZ40469.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096242-1|AAZ40467.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096241-1|AAZ40466.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096240-1|AAZ40465.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
DQ096239-1|AAZ40464.1| 78|Drosophila melanogaster ACP24A4 prot... 31 1.6
AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellula... 31 2.8
AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-P... 31 2.8
BT022720-1|AAY55136.1| 146|Drosophila melanogaster RH09956p pro... 30 4.9
AE014134-657|AAF51074.2| 129|Drosophila melanogaster CG10031-PA... 30 4.9
AE014134-654|AAF51077.1| 82|Drosophila melanogaster CG16713-PA... 30 4.9
DQ096245-1|AAZ40470.1| 78|Drosophila melanogaster ACP24A4 prot... 29 6.4
>AY119012-1|AAM50872.1| 132|Drosophila melanogaster LP04037p
protein.
Length = 132
Score = 36.3 bits (80), Expect = 0.056
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
+YN Q CE F+YGGC G + +F+
Sbjct: 72 AYNVDTQSCEEFVYGGCAGNKNNFE 96
>AE014134-656|AAF51075.1| 132|Drosophila melanogaster CG3604-PA
protein.
Length = 132
Score = 36.3 bits (80), Expect = 0.056
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
+YN Q CE F+YGGC G + +F+
Sbjct: 72 AYNVDTQSCEEFVYGGCAGNKNNFE 96
>BT023101-1|AAY55517.1| 84|Drosophila melanogaster IP03754p
protein.
Length = 84
Score = 33.9 bits (74), Expect = 0.30
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 225 LNSLSYNQAPQQCEAFIYGGCQGKRQSF 308
+ S +YN + CE FIYGGC G F
Sbjct: 44 VESYAYNPIKRHCEPFIYGGCGGNDNRF 71
>BT023081-1|AAY55497.1| 84|Drosophila melanogaster IP03854p
protein.
Length = 84
Score = 33.9 bits (74), Expect = 0.30
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 225 LNSLSYNQAPQQCEAFIYGGCQGKRQSF 308
+ S +YN + CE FIYGGC G F
Sbjct: 44 VESYAYNPIKRHCEPFIYGGCGGNDNRF 71
>AE014134-658|AAF51073.1| 91|Drosophila melanogaster CG2816-PA
protein.
Length = 91
Score = 33.9 bits (74), Expect = 0.30
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 225 LNSLSYNQAPQQCEAFIYGGCQGKRQSF 308
+ S +YN + CE FIYGGC G F
Sbjct: 51 VESYAYNPIKRHCEPFIYGGCGGNDNRF 78
>AY070702-1|AAL48173.1| 82|Drosophila melanogaster RH38008p
protein.
Length = 82
Score = 33.5 bits (73), Expect = 0.39
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 231 SLSYNQAPQQCEAFIYGGCQGKRQSF 308
S SY+ CE FIYGGC G F
Sbjct: 45 SFSYHPETNSCEKFIYGGCGGNENRF 70
>AY070668-1|AAL48139.1| 82|Drosophila melanogaster RH05411p
protein.
Length = 82
Score = 33.5 bits (73), Expect = 0.39
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 231 SLSYNQAPQQCEAFIYGGCQGKRQSF 308
S SY+ CE FIYGGC G F
Sbjct: 45 SFSYHPETNSCEKFIYGGCGGNENRF 70
>AE014134-655|AAF51076.1| 82|Drosophila melanogaster CG16712-PA
protein.
Length = 82
Score = 33.5 bits (73), Expect = 0.39
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 231 SLSYNQAPQQCEAFIYGGCQGKRQSF 308
S SY+ CE FIYGGC G F
Sbjct: 45 SFSYHPETNSCEKFIYGGCGGNENRF 70
>DQ096258-1|AAZ40483.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.91
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNENSFE 67
>DQ096257-1|AAZ40482.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.91
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNENSFE 67
>DQ096256-1|AAZ40481.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.91
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNENSFE 67
>DQ096253-1|AAZ40478.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.91
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNENSFE 67
>DQ096252-1|AAZ40477.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.91
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNENSFE 67
>DQ096250-1|AAZ40475.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.91
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNENSFE 67
>BT022485-1|AAY54901.1| 78|Drosophila melanogaster IP06105p
protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.91
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNENSFE 67
>BT022473-1|AAY54889.1| 78|Drosophila melanogaster IP06005p
protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.91
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNENSFE 67
>AY060990-1|AAL28538.1| 461|Drosophila melanogaster HL01082p
protein.
Length = 461
Score = 32.3 bits (70), Expect = 0.91
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSF 308
+Y+ Q C +F YGGC+G R +F
Sbjct: 359 AYDPQNQHCYSFTYGGCRGNRNNF 382
>AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular
matrix protein papilin3 protein.
Length = 2898
Score = 32.3 bits (70), Expect = 0.91
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHI 317
+N A Q CE F YGGC G F +
Sbjct: 2271 FNTASQACEPFTYGGCDGTGNRFSDL 2296
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSF 308
+YN+ +C++F YGGC G F
Sbjct: 2018 NYNETEGRCQSFYYGGCGGNDNRF 2041
>AF135119-1|AAD31715.1| 763|Drosophila melanogaster fat-spondin
protein.
Length = 763
Score = 32.3 bits (70), Expect = 0.91
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSF 308
+Y+ Q C +F YGGC+G R +F
Sbjct: 661 AYDPQNQHCYSFTYGGCRGNRNNF 684
>AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-PA,
isoform A protein.
Length = 2894
Score = 32.3 bits (70), Expect = 0.91
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHI 317
+N A Q CE F YGGC G F +
Sbjct: 2271 FNTASQACEPFTYGGCDGTGNRFSDL 2296
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSF 308
+YN+ +C++F YGGC G F
Sbjct: 2018 NYNETEGRCQSFYYGGCGGNDNRF 2041
>AE014134-653|ABI31285.1| 78|Drosophila melanogaster CG31779-PB
protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.91
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNENSFE 67
>AE013599-2411|AAM68494.2| 628|Drosophila melanogaster CG6953-PB,
isoform B protein.
Length = 628
Score = 32.3 bits (70), Expect = 0.91
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSF 308
+Y+ Q C +F YGGC+G R +F
Sbjct: 526 AYDPQNQHCYSFTYGGCRGNRNNF 549
>AE013599-2409|AAF57910.1| 763|Drosophila melanogaster CG6953-PA,
isoform A protein.
Length = 763
Score = 32.3 bits (70), Expect = 0.91
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSF 308
+Y+ Q C +F YGGC+G R +F
Sbjct: 661 AYDPQNQHCYSFTYGGCRGNRNNF 684
>DQ096255-1|AAZ40480.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096254-1|AAZ40479.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096251-1|AAZ40476.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096249-1|AAZ40474.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096248-1|AAZ40473.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096247-1|AAZ40472.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096246-1|AAZ40471.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096244-1|AAZ40469.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096242-1|AAZ40467.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096241-1|AAZ40466.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096240-1|AAZ40465.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>DQ096239-1|AAZ40464.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQ 311
SY+ C FIYGGCQG SF+
Sbjct: 43 SYDAQYNVCFNFIYGGCQGNDNSFE 67
>AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellular
matrix protein papilin2 protein.
Length = 2776
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSF 308
+YN+ +C++F YGGC G F
Sbjct: 2018 NYNETEGRCQSFYYGGCGGNDNRF 2041
>AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-PB,
isoform B protein.
Length = 2772
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSF 308
+YN+ +C++F YGGC G F
Sbjct: 2018 NYNETEGRCQSFYYGGCGGNDNRF 2041
>BT022720-1|AAY55136.1| 146|Drosophila melanogaster RH09956p
protein.
Length = 146
Score = 29.9 bits (64), Expect = 4.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 225 LNSLSYNQAPQQCEAFIYGGCQG 293
L YN+ + CE F YGGC+G
Sbjct: 105 LERFYYNKDSKACETFKYGGCRG 127
>AE014134-657|AAF51074.2| 129|Drosophila melanogaster CG10031-PA
protein.
Length = 129
Score = 29.9 bits (64), Expect = 4.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 225 LNSLSYNQAPQQCEAFIYGGCQG 293
L YN+ + CE F YGGC+G
Sbjct: 88 LERFYYNKDSKACETFKYGGCRG 110
>AE014134-654|AAF51077.1| 82|Drosophila melanogaster CG16713-PA
protein.
Length = 82
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 231 SLSYNQAPQQCEAFIYGGCQGKRQSF 308
S SY+ +C FIYGGC G F
Sbjct: 45 SWSYDADRNECVKFIYGGCGGNNNRF 70
>DQ096245-1|AAZ40470.1| 78|Drosophila melanogaster ACP24A4
protein.
Length = 78
Score = 29.5 bits (63), Expect = 6.4
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 261 CEAFIYGGCQGKRQSFQ 311
C FIYGGCQG SF+
Sbjct: 51 CFNFIYGGCQGNDNSFE 67
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,132,312
Number of Sequences: 53049
Number of extensions: 268659
Number of successful extensions: 680
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -