Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_E13
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 35 0.067
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 35 0.067
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 35 0.067
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 34 0.15
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 33 0.36
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 32 0.47
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 32 0.47
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 32 0.47
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 31 0.83
U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 31 0.83
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 29 3.3
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 3.3
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 3.3
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 3.3
AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensor... 29 3.3
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 29 3.3
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 29 3.3
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 3.3
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 3.3
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 3.3
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 3.3
AF386744-1|AAL57289.1| 384|Caenorhabditis elegans PAF-1 protein. 29 5.8
AF039716-8|AAB96738.1| 384|Caenorhabditis elegans Paf-acetylhyd... 29 5.8
U64598-13|AAL65779.1| 388|Caenorhabditis elegans Paf-acetylhydr... 28 7.7
AF386745-1|AAL57290.1| 388|Caenorhabditis elegans PAF-2 protein. 28 7.7
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 28 7.7
AF016680-2|AAB66164.2| 253|Caenorhabditis elegans Hypothetical ... 28 7.7
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
C37C3.6c protein.
Length = 1487
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
YN A QCE F YGGC G F I + R
Sbjct: 1451 YNTASHQCETFTYGGCLGNTNRFATIEECQAR 1482
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQ 311
YN Q+CE F YGGC G F+
Sbjct: 1289 YNAFSQECETFTYGGCGGNLNRFR 1312
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQH 314
YN+A C F YGGCQG F +
Sbjct: 1394 YNKADGTCNRFHYGGCQGTNNRFDN 1418
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
YN A QCE F YGGC G F I + R
Sbjct: 1522 YNTASHQCETFTYGGCLGNTNRFATIEECQAR 1553
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQ 311
YN Q+CE F YGGC G F+
Sbjct: 1289 YNAFSQECETFTYGGCGGNLNRFR 1312
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQH 314
YN+A C F YGGCQG F +
Sbjct: 1465 YNKADGTCNRFHYGGCQGTNNRFDN 1489
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
YN A QCE F YGGC G F I + R
Sbjct: 1522 YNTASHQCETFTYGGCLGNTNRFATIEECQAR 1553
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQ 311
YN Q+CE F YGGC G F+
Sbjct: 1289 YNAFSQECETFTYGGCGGNLNRFR 1312
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQH 314
YN+A C F YGGCQG F +
Sbjct: 1465 YNKADGTCNRFHYGGCQGTNNRFDN 1489
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 225 LNSLSYNQAPQQCEAFIYGGCQGKRQSF 308
L Y+ Q C F YGGC+G F
Sbjct: 1927 LEKYFYDPVIQSCHMFHYGGCEGNANRF 1954
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQ 311
YN QCE FI+ GC+G R F+
Sbjct: 640 YNHEKTQCERFIFTGCKGNRNQFE 663
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
YN + CE+F+Y GCQG F + ++
Sbjct: 607 YNAETKTCESFLYTGCQGNNNRFNSLNECQS 637
Score = 30.3 bits (65), Expect = 1.9
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
YN ++C+++++ GC G +F I + +N
Sbjct: 716 YNNQAKECQSYLFLGCDGNSNNFPSIEKCQN 746
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
protein ZC84.1 protein.
Length = 1556
Score = 32.3 bits (70), Expect = 0.47
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
+N QC +F +GGC G +F +I + RN
Sbjct: 758 FNIVTSQCTSFQFGGCDGNANNFLNIQQCRN 788
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
YN +QC+ F Y GCQG +F I +N
Sbjct: 544 YNARTRQCQMFEYTGCQGNDNNFDSIMDCQN 574
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSF 308
YN Q CE+F Y GC G +F
Sbjct: 650 YNPQTQNCESFQYNGCDGNSNNF 672
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 32.3 bits (70), Expect = 0.47
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSF 308
+Y++A C+ FI+GGCQG +F
Sbjct: 1339 AYDKASGSCKKFIFGGCQGNLNNF 1362
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 216 APPLNSLSYNQAPQQCEAFIYGGCQGKRQSF 308
APP + Y+Q QC+ F Y G +G + +F
Sbjct: 705 APPTSRWYYDQTDMQCKQFTYNGRRGNQNNF 735
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 32.3 bits (70), Expect = 0.47
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSF 308
+Y++A C+ FI+GGCQG +F
Sbjct: 1757 AYDKASGSCKKFIFGGCQGNLNNF 1780
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 216 APPLNSLSYNQAPQQCEAFIYGGCQGKRQSF 308
APP + Y+Q QC+ F Y G +G + +F
Sbjct: 1123 APPTSRWYYDQTDMQCKQFTYNGRRGNQNNF 1153
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 237 SYNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
+++ Q C AF YGGC G +F + R+R
Sbjct: 821 AFDAEAQDCRAFTYGGCGGNGNNFATMQECRSR 853
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQ 311
YN+ Q+CE F Y GC G +++
Sbjct: 441 YNEDSQKCEQFTYSGCGGNGNNYE 464
Score = 29.5 bits (63), Expect = 3.3
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHI 317
+N +C+ F +GGC+G + +F+ +
Sbjct: 557 FNADLNECKYFFWGGCEGNQNNFERV 582
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSF 308
+N QCE F YG C G +F
Sbjct: 1241 FNSQTGQCEQFAYGSCGGNENNF 1263
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQ 311
+N CE FIY GCQG +F+
Sbjct: 429 FNAKTGNCEEFIYSGCQGNANNFE 452
Score = 28.7 bits (61), Expect = 5.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSF 308
+N + C+ F Y GC+G R +F
Sbjct: 649 FNADSKTCQTFEYNGCEGNRNNF 671
>U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical
protein T22F7.3 protein.
Length = 988
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSF 308
YN A + CE F Y GCQG +F
Sbjct: 465 YNAATRSCEMFQYTGCQGNDNNF 487
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSF 308
+N Q CE+F Y GC G +F
Sbjct: 574 FNSNKQSCESFQYEGCDGNANNF 596
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
YN + CE F Y GCQG +F+ + +N
Sbjct: 581 YNAVTRACEIFDYTGCQGNDNNFETLLECQN 611
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSF 308
YN Q+CE++ Y GC G +F
Sbjct: 690 YNSQTQECESYQYNGCDGNSNNF 712
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
+N + Q+C+ F Y GC G +F+ + + +N
Sbjct: 384 FNPSTQKCQPFHYYGCSGNGNNFETVDQCQN 414
>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
protein ZC84.6 protein.
Length = 1474
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQ 311
Y+ A ++C++F Y GCQG +F+
Sbjct: 457 YSAATRECQSFEYTGCQGNDNNFE 480
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSF 308
YN Q+CE+F Y GC G +F
Sbjct: 566 YNPQTQECESFEYLGCDGNSNTF 588
Score = 29.5 bits (63), Expect = 3.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
+N ++C F+Y GC G +F + + N
Sbjct: 678 FNIVTRKCSPFVYNGCDGNPNNFASLNQCNN 708
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 3.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHI 317
Y++ +C F YGGC+G F +
Sbjct: 44 YDRYDHRCRRFFYGGCEGNENRFDSL 69
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 3.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHI 317
Y++ +C F YGGC+G F +
Sbjct: 44 YDRYDHRCRRFFYGGCEGNENRFDSL 69
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 228 NSLSYNQAPQQCEAFIYGGCQGKRQSF 308
N ++ ++C AF +GGCQ K Q+F
Sbjct: 939 NRFYFDHDRKKCVAFHWGGCQSKSQNF 965
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
Y++A + C F Y GC G F + + N
Sbjct: 1149 YDRASRTCRPFAYSGCGGNSNRFMTVSQCEN 1179
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 228 NSLSYNQAPQQCEAFIYGGCQGKRQSF 308
N ++ ++C AF +GGCQ K Q+F
Sbjct: 1153 NRFYFDHDRKKCVAFHWGGCQSKSQNF 1179
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
Y++A + C F Y GC G F + + N
Sbjct: 1363 YDRASRTCRPFAYSGCGGNSNRFMTVSQCEN 1393
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 228 NSLSYNQAPQQCEAFIYGGCQGKRQSF 308
N ++ ++C AF +GGCQ K Q+F
Sbjct: 1289 NRFYFDHDRKKCVAFHWGGCQSKSQNF 1315
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
Y++A + C F Y GC G F + + N
Sbjct: 1499 YDRASRTCRPFAYSGCGGNSNRFMTVSQCEN 1529
>AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform j protein.
Length = 255
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
Y+ A +C+ F + GC G F RNR
Sbjct: 64 YDAAVDECKRFTFSGCGGNSNRFMRRAHCRNR 95
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
Y+ A +C+ F + GC G F RNR
Sbjct: 64 YDAAVDECKRFTFSGCGGNSNRFMRRAHCRNR 95
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
Y+ A +C+ F + GC G F RNR
Sbjct: 64 YDAAVDECKRFTFSGCGGNSNRFMRRAHCRNR 95
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
Y+ A +C+ F + GC G F RNR
Sbjct: 64 YDAAVDECKRFTFSGCGGNSNRFMRRAHCRNR 95
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 228 NSLSYNQAPQQCEAFIYGGCQGKRQSF 308
N ++ ++C AF +GGCQ K Q+F
Sbjct: 1338 NRFYFDHDRKKCVAFHWGGCQSKSQNF 1364
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
Y++A + C F Y GC G F + + N
Sbjct: 1548 YDRASRTCRPFAYSGCGGNSNRFMTVSQCEN 1578
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
Y+ A +C+ F + GC G F RNR
Sbjct: 64 YDAAVDECKRFTFSGCGGNSNRFMRRAHCRNR 95
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 228 NSLSYNQAPQQCEAFIYGGCQGKRQSF 308
N ++ ++C AF +GGCQ K Q+F
Sbjct: 1330 NRFYFDHDRKKCVAFHWGGCQSKSQNF 1356
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
Y++A + C F Y GC G F + + N
Sbjct: 1540 YDRASRTCRPFAYSGCGGNSNRFMTVSQCEN 1570
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
Y+ A +C+ F + GC G F RNR
Sbjct: 64 YDAAVDECKRFTFSGCGGNSNRFMRRAHCRNR 95
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 228 NSLSYNQAPQQCEAFIYGGCQGKRQSF 308
N ++ ++C AF +GGCQ K Q+F
Sbjct: 1341 NRFYFDHDRKKCVAFHWGGCQSKSQNF 1367
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
Y++A + C F Y GC G F + + N
Sbjct: 1551 YDRASRTCRPFAYSGCGGNSNRFMTVSQCEN 1581
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRNR 335
Y+ A +C+ F + GC G F RNR
Sbjct: 64 YDAAVDECKRFTFSGCGGNSNRFMRRAHCRNR 95
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 228 NSLSYNQAPQQCEAFIYGGCQGKRQSF 308
N ++ ++C AF +GGCQ K Q+F
Sbjct: 1342 NRFYFDHDRKKCVAFHWGGCQSKSQNF 1368
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 240 YNQAPQQCEAFIYGGCQGKRQSFQHIGRMRN 332
Y++A + C F Y GC G F + + N
Sbjct: 1552 YDRASRTCRPFAYSGCGGNSNRFMTVSQCEN 1582
>AF386744-1|AAL57289.1| 384|Caenorhabditis elegans PAF-1 protein.
Length = 384
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = -2
Query: 365 NSKVSVTLCISVSHSANVLKRLXFPLAASVNECFTXXXXXXXXXXXXXXXXQGPTAPKAC 186
N + V I ++ N+L L+ +V++ FT GPT P C
Sbjct: 286 NENLEVMRKILPNNEGNIL----LTLSGAVHQSFTDFPFVFPNWLAKQFGVHGPTEPYLC 341
Query: 185 XQSGAXVGAARXTDGKHG 132
QS + + DGK G
Sbjct: 342 MQSAIELTLSFLKDGKDG 359
>AF039716-8|AAB96738.1| 384|Caenorhabditis elegans
Paf-acetylhydrolase protein 1 protein.
Length = 384
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = -2
Query: 365 NSKVSVTLCISVSHSANVLKRLXFPLAASVNECFTXXXXXXXXXXXXXXXXQGPTAPKAC 186
N + V I ++ N+L L+ +V++ FT GPT P C
Sbjct: 286 NENLEVMRKILPNNEGNIL----LTLSGAVHQSFTDFPFVFPNWLAKQFGVHGPTEPYLC 341
Query: 185 XQSGAXVGAARXTDGKHG 132
QS + + DGK G
Sbjct: 342 MQSAIELTLSFLKDGKDG 359
>U64598-13|AAL65779.1| 388|Caenorhabditis elegans
Paf-acetylhydrolase protein 2,isoform a protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = -2
Query: 302 LXFPLAASVNECFTXXXXXXXXXXXXXXXXQGPTAPKACXQSGAXVGAARXTDGKHGS 129
L L +V++CF+ QG T P C Q+ + A +GK G+
Sbjct: 307 LALTLNGAVHQCFSDFPFIFPSWLAKKFGVQGRTEPSLCMQAAIELSLAFLENGKDGA 364
>AF386745-1|AAL57290.1| 388|Caenorhabditis elegans PAF-2 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = -2
Query: 302 LXFPLAASVNECFTXXXXXXXXXXXXXXXXQGPTAPKACXQSGAXVGAARXTDGKHGS 129
L L +V++CF+ QG T P C Q+ + A +GK G+
Sbjct: 307 LALTLNGAVHQCFSDFPFIFPSWLAKKFGVQGRTEPSLCMQAAIELSLAFLENGKDGA 364
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +3
Query: 207 PLXAPPLNSLSYNQAPQQCEAFIYGGCQGKRQSFQHIG 320
P PP ++ + + C F + GC G +F+ G
Sbjct: 131 PCGVPPATRYYFDSSSKTCRPFAFTGCGGNENNFKGKG 168
>AF016680-2|AAB66164.2| 253|Caenorhabditis elegans Hypothetical
protein R12A1.3 protein.
Length = 253
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 204 GPLXAPPLNSLSYNQAPQQCEAFIYGGCQGKRQSFQHI 317
G AP + Y+ + +C F+Y GC G +FQ +
Sbjct: 154 GSCTAPAVR-FYYDASSGRCNQFMYSGCGGNANNFQSL 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,184,159
Number of Sequences: 27780
Number of extensions: 128993
Number of successful extensions: 511
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -