Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_E09
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.097
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 31 0.30
SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr 2||... 31 0.30
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 30 0.52
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 0.69
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 29 0.69
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 29 0.91
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 29 1.2
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 1.2
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 28 1.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 1.6
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy... 28 2.1
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 27 2.8
SPAC23C4.06c |||methyltransferase |Schizosaccharomyces pombe|chr... 27 2.8
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 27 3.7
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 27 3.7
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 27 4.8
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 27 4.8
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 4.8
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 4.8
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 26 6.4
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 26 8.5
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.3 bits (70), Expect = 0.097
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 8/141 (5%)
Frame = +3
Query: 237 HIAELERQRQAMIQTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQREQLQNTDR 416
+I EL++Q Q ++ E+ R + D +I E L + E + +
Sbjct: 562 NIRELQQQNQNLLSAVHELADRMEKDEKPDL----DGAEI---QEETLIKANETIDQLTK 614
Query: 417 RLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPSKSPATSNVRNAGTSSS--RLD 590
L+E++ L YS K + +S+ + + + TP+ T+ + S RL+
Sbjct: 615 MLEEVSDQLRYSLKERDFFRSLVQENEKLLD-MAPATPNSKLNTNLIEQTSYQRSLIRLE 673
Query: 591 ------ETLDNMSRNVEDRFE 635
E+L ++SRN E +FE
Sbjct: 674 QLTNELESLKSISRNKEKKFE 694
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 30.7 bits (66), Expect = 0.30
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 528 PSKSPATSNVRNAGTSSSRLDETLDNMSRNVEDRFESHPS-ARLHGLSQES-AKSPETEN 701
PS SP+T+NV NA TSS+ ++ R + R ES S + +H S S + +TE
Sbjct: 214 PSSSPSTTNVSNASTSSAPIN------PRAPQTRRESISSTSSIHYCSSSSLSYLHDTER 267
Query: 702 ERVNNILDS 728
V ++ DS
Sbjct: 268 ALVGSLTDS 276
>SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 234 GHIAELERQRQAMIQTQREIEQRTIDSSTRSI-GLLRDSEQIGIATAEELSRQREQLQNT 410
G A ++ A++++Q + + SS ++I + + I A+ +S QRE +Q
Sbjct: 200 GDGANTRYEQMALLESQTDTYSQQRMSSIQNIESTITELGGIFSQLAQMVSEQRETVQRI 259
Query: 411 DRRLDEINTNLNYSQKHL 464
D D+I +N+ +Q+ +
Sbjct: 260 DMHTDDIVSNIGSAQREI 277
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 29.9 bits (64), Expect = 0.52
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 336 LRDSEQIGIATAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVF-YGLKNYISG 512
+RDS+ I+ ELS+ E++ + R D++N N S+ ++ V Y L S
Sbjct: 267 VRDSDWELISLRNELSKLDEKILSLQRETDDVNIAQNKSKLIQRDLQKVLDYKLGILQSL 326
Query: 513 KSDQTPSKSPATSNVRNAGTSSSRLDETLDNMSRNVEDR 629
K+D P+ S + N L++ L+ + R++E R
Sbjct: 327 KND--GPNGPSASAIDN---DLKMLEQQLNVLGRHLEGR 360
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.5 bits (63), Expect = 0.69
Identities = 29/156 (18%), Positives = 68/156 (43%)
Frame = +3
Query: 246 ELERQRQAMIQTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQREQLQNTDRRLD 425
+LE Q Q +++E + + +L S +T+ + SR + +L + + ++
Sbjct: 1276 QLESQLQTEKAAVKKLENSNEEYKRHNQEILL-SLNSSTSTSSDASRLKNELVSKENLIE 1334
Query: 426 EINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPSKSPATSNVRNAGTSSSRLDETLDN 605
E+N + + + L +KS L+N +Q+ + N + A ++ ++ + N
Sbjct: 1335 ELNQEIGHLKSELETVKSKSEDLEN--ERAQNQSKIEQLELKNTKLAAAWRTKYEQVV-N 1391
Query: 606 MSRNVEDRFESHPSARLHGLSQESAKSPETENERVN 713
S ++ S + L + A+ + NE++N
Sbjct: 1392 KSLEKHNQIRQQLSQKTSELEAKVAECHQL-NEQLN 1426
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 29.5 bits (63), Expect = 0.69
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Frame = +3
Query: 333 LLRDSE--QIGIATAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKN-- 500
L+ SE QI + ++ SR+R+ L+ + ++E NL Y+ K + K +
Sbjct: 183 LINSSELAQIDLELSKLYSRRRQVLERLSK-IEE--QNLKYTSKLASVEKLMLDSDAQDL 239
Query: 501 YISGKSDQTPSKSPATSNVRNAGTSSSRLDETLDNMSRNVEDRFESHPSARLHGLS---- 668
Y S D PS+ A N N D+ DN+S PS +S
Sbjct: 240 YSSYSHDLIPSQIEAGKNGANPDVFDDTHDKYTDNLSARAISPRAPRPSTASEVVSDYFE 299
Query: 669 QESA--KSPETENERVN-NILDSNL 734
Q SA K+PE VN N + NL
Sbjct: 300 QNSAFSKAPENTESSVNQNYIVGNL 324
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 29.1 bits (62), Expect = 0.91
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 243 AELERQRQAMIQTQREIE--QRTIDSSTRSIGLLRDSEQIGIATAEELSRQREQLQNTDR 416
AE+ERQR A Q Q+ +E Q R +Q + T +L+ +QL T
Sbjct: 367 AEMERQRMAAQQHQQALEAIQMAQAEQQRIAQEQLAQQQFQMQTQGQLAELEQQLLATRG 426
Query: 417 RLDEINTNLN 446
+L++ N LN
Sbjct: 427 QLEQSNVLLN 436
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 531 SKSPATSNVRNAGTSSSRLDETLDNMSRNVEDRFESHPSARLHGLS 668
S+SP V+ GT+ ++ +ET N +D FE P H +S
Sbjct: 129 SESPIPQQVKRDGTTDAKNEET-TKPENNEKDDFEEEPPLPKHKIS 173
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/90 (21%), Positives = 36/90 (40%)
Frame = +3
Query: 507 SGKSDQTPSKSPATSNVRNAGTSSSRLDETLDNMSRNVEDRFESHPSARLHGLSQESAKS 686
S S + S S ++S+ ++ +SSS + + SH S+ S S+
Sbjct: 174 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSR 233
Query: 687 PETENERVNNILDSNLDEWCMLYPGSTSRS 776
P + + + + S + P S+S S
Sbjct: 234 PSSSSSFITTMSSSTFISTVTVTPSSSSSS 263
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 28.3 bits (60), Expect = 1.6
Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 5/148 (3%)
Frame = +3
Query: 288 EIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQREQLQNTDRRLDEINTNLNYSQKHLN 467
E+++ + S + RD ++ +++ ++ +LDE L S+ N
Sbjct: 762 ELDRLILQSDQAIKKIERDMQEWKHNKGSKMAELEKEFNQYKHKLDEFTPILEKSENDYN 821
Query: 468 GIKSVFYGLKNYISGKSDQTPSKSPATSNVRNAGTSSSRLDETLDNMSRNVEDRFE--SH 641
G+K L+ + TS ++ T + L+ +L N N + E
Sbjct: 822 GVKLECEQLEGELQNHQQSLVQGESTTSLIK---TEIAELELSLVNEEHNRKKLTELIEI 878
Query: 642 PSARLHGLSQE---SAKSPETENERVNN 716
SA+ GL++E + S +T +NN
Sbjct: 879 ESAKFSGLNKEIDSLSTSMKTFESEINN 906
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.3 bits (60), Expect = 1.6
Identities = 29/141 (20%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Frame = +3
Query: 324 SIGLLRDSEQIGIATAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNY 503
+IG L+DS EE+ +E + +L + + L+ ++ +K +N
Sbjct: 355 TIGSLKDSRTSNSQLEEEMVELKESNRTIHSQLTDAESKLSSFEQENKSLKGSIDEYQNN 414
Query: 504 ISGKSDQTPSKS----PATSNVRNAGTSSSRLDETLDNMSRNVED--RFESHPSARLHGL 665
+S K S A S++ +A + ++ D ++ ++D + E A L+
Sbjct: 415 LSSKDKMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQDLRACLNSS 474
Query: 666 SQE-SAKSP--ETENERVNNI 719
S E KS + +++ +NN+
Sbjct: 475 SNELKEKSALIDKKDQELNNL 495
>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 246 ELER-QRQAMIQTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQREQLQNTDRRL 422
ELER Q Q M+Q Q E EQR I+ L ++ Q A A + +Q+ L++ D ++
Sbjct: 78 ELERLQHQKMLQIQAE-EQRKIELQQEQERLEQERRQKEEAIALQKQQQQRLLRSKDPKV 136
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 288 EIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQ----REQLQNTDRRLDE 428
E + ++ T+ + L D+E I AE+LSR+ E+L+ D+ L E
Sbjct: 54 ESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRE 104
>SPAC23C4.06c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 327
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 751 YIPAQHLGVALGEEIEQQNHLVDTIQTKLKLQXSEW 858
Y PA H + L +E QN +VD+I W
Sbjct: 79 YFPASHQQIQLTLHLENQNSIVDSIHINADTVLPVW 114
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 216 ANKPYGGHIAELERQRQAMIQTQREIEQRTIDSSTRSIGLLRDS 347
AN+ HI ELE + + + + R + QR +T+ I LLR++
Sbjct: 358 ANEKDAAHITELETKLKELHEQNRRL-QRQKSLATQEIDLLREN 400
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 205 KHSKQISLMEVILQNWNVNAKL 270
K+SKQI ++E +QNW +A+L
Sbjct: 636 KNSKQIQVVERKIQNWRKSAQL 657
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 591 ETLDNMSRNVEDRFESHPSARLHGLSQESAKSPETENERVNNILD 725
+ LDN+S VE + S S+ L GLS + + + ++ N ++
Sbjct: 54 DALDNVSALVEGKVSSKLSSLLEGLSDSKSSTLVVADPKLGNAIN 98
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 26.6 bits (56), Expect = 4.8
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +3
Query: 447 YSQKHLNGIKS----VFYGLKNYISGKS-DQTPSKSPATSNVRNAGTSSSRLDETLDNMS 611
+S N +KS +F K Y + S D TPSK P +++ + T+ D+M
Sbjct: 347 FSASEPNTVKSTNRLIFSERKAYAADDSIDNTPSKVPIVNSLSDPRTNRPFFYSNPDSMY 406
Query: 612 RNVEDRFESHPSARLHGLSQES 677
R++ + S L L++++
Sbjct: 407 RSISNPLHLVDSQHLSPLNRKT 428
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 207 TQQANK--PYGGHIAELERQRQAMIQTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEEL 380
T+Q N+ P + ELER+ ++ ++ + D +++ RD+E++ + EL
Sbjct: 1237 TKQVNELSPKASKVPELERKITNLMHEYSQLGKTFEDEKRKALIASRDNEELR-SLKSEL 1295
Query: 381 SRQREQLQNTDRRLDEINT 437
+R+ + L+E+ T
Sbjct: 1296 ESKRKLEVEYQKVLEEVKT 1314
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.6 bits (56), Expect = 4.8
Identities = 30/170 (17%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Frame = +3
Query: 240 IAELERQRQAMIQTQREIEQRTIDSSTRSIGLLRDSEQIGI---ATAEELSRQREQLQNT 410
I+E E + ++ I D + R I LL++ +Q + + + + ++E+ +
Sbjct: 337 ISEKENELSEILPKYNAIVSEADDLNKR-IMLLKNQKQSLLDKQSRTSQFTTKKERDEWI 395
Query: 411 DRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPSKSPATSNVRNAGTSSSRLD 590
+L +IN N+N ++++ + +K+ + ++N + K + K ++ + G S+L
Sbjct: 396 RNQLLQINRNINSTKENSDYLKTEYDEMENELKAKLSR---KKEIEISLESQGDRMSQLL 452
Query: 591 ETLDNMSRNVEDRFESHPSA-RLHGLSQESAKSPETENERVNNILDSNLD 737
+ +++ E+ + S R + S ++ + + R L + +D
Sbjct: 453 ANITSINERKENLTDKRKSLWREEAKLKSSIENVKDDLSRSEKALGTTMD 502
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 573 SSSRLDETLDNMSRNVEDRFESHPSARLHGLSQESAKSPETENERVNNI 719
SSSR L+ S ++ R E Q+ AKSP ++ VN I
Sbjct: 728 SSSRELSNLNERSITIDPRAEEQAQGLEQEQGQDEAKSPAEQSSSVNLI 776
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 594 FHQACYYLYQHYVHSRSLDF*MVFDHFFRKYN 499
F QAC ++ +HSR+LD F H ++
Sbjct: 241 FEQACLDEFELGLHSRNLDLLRKFSHVLHDFS 272
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,399,359
Number of Sequences: 5004
Number of extensions: 69232
Number of successful extensions: 259
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -