Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_E04
(883 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 1.2
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 28 2.0
SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosa... 27 3.5
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 27 3.5
SPAC1F5.08c |yam8|ehs1|calcium transport protein|Schizosaccharom... 27 4.7
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 26 6.2
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 8.2
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 628 NHLYPISSSLGVNSTTLVVSCVTLSLETXVT 720
N PI+SS VNS+T + S TL+ T +T
Sbjct: 3139 NSSTPITSSTVVNSSTPITSSTTLNTSTPIT 3169
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 628 NHLYPISSSLGVNSTTLVVSCVTLSLETXVTE--VIGVLCPPGSRRSVNGKCVPTLL*IL 801
N PI+SS VNS+T + S ++ T +T V+ P S VN T +L
Sbjct: 1339 NSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVL 1398
Query: 802 N 804
N
Sbjct: 1399 N 1399
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 628 NHLYPISSSLGVNSTTLVVSCVTLSLETXVTE--VIGVLCPPGSRRSVNGKCVPTLL*IL 801
N PI+SS VNS+T + S ++ T +T V+ P S VN T +L
Sbjct: 2179 NSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVL 2238
Query: 802 N 804
N
Sbjct: 2239 N 2239
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT 720
PI+SS VNS+T + S TL+ T +T
Sbjct: 3287 PITSSTVVNSSTPITSSTTLNTSTPIT 3313
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVTE--VIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S ++ T +T V+ P S VN T +LN
Sbjct: 1163 PITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLN 1219
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVTE--VIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S ++ T +T V+ P S VN T +LN
Sbjct: 1475 PITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLN 1531
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 628 NHLYPISSSLGVNSTTLVVSCVTLSLETXVTE--VIGVLCPPGSRRSVNGKCVPTLL*IL 801
N PI+SS G+N++T + S L+ T +T V+ P S ++N T +L
Sbjct: 931 NSSTPITSSTGLNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVL 990
Query: 802 N 804
N
Sbjct: 991 N 991
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 628 NHLYPISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*IL 801
N PI+SS VNS+T + S L+ T +T V+ P S ++N T +L
Sbjct: 1735 NSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVL 1794
Query: 802 N 804
N
Sbjct: 1795 N 1795
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S ++N T +LN
Sbjct: 491 PITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLN 547
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S ++N T +LN
Sbjct: 1835 PITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLN 1891
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S ++N T +LN
Sbjct: 2027 PITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLN 2083
Score = 27.1 bits (57), Expect = 3.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S VN T +LN
Sbjct: 2291 PITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLN 2347
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S ++N T +LN
Sbjct: 2603 PITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLN 2659
Score = 27.1 bits (57), Expect = 3.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S VN T +LN
Sbjct: 2699 PITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLN 2755
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S ++N T +LN
Sbjct: 2927 PITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLN 2983
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S +N T +LN
Sbjct: 899 PITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTGLNTSTPITSSSVLN 955
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S +N T +LN
Sbjct: 1055 PITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLN 1111
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S +N T +LN
Sbjct: 1199 PITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLN 1255
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S ++N T +LN
Sbjct: 1571 PITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLN 1627
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT--EVIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S L+ T +T V+ P S ++N T +LN
Sbjct: 2807 PITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLN 2863
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 628 NHLYPISSSLGVNSTTLVVSCVTLSLETXVT 720
N PI+SS VNS+T + S L+ T +T
Sbjct: 3367 NSSTPITSSTVVNSSTPITSSTALNTSTPIT 3397
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 628 NHLYPISSSLGVNSTTLVVSCVTLSLETXVT 720
N PI+SS VNS+T + S L+ T +T
Sbjct: 3403 NSSTPITSSTVVNSSTPITSSTALNTSTPIT 3433
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT 720
PI+SS VNS+T + S L+ T +T
Sbjct: 1511 PITSSTVVNSSTPITSSTVLNTSTPIT 1537
Score = 26.2 bits (55), Expect = 6.2
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVTE--VIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S ++ T +T V+ P S ++N T +LN
Sbjct: 1655 PITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLN 1711
Score = 26.2 bits (55), Expect = 6.2
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVTE--VIGVLCPPGSRRSVNGKCVPTLL*ILN 804
PI+SS VNS+T + S ++ T +T V+ P S ++N T +LN
Sbjct: 2267 PITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLN 2323
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT 720
PI+SS VNS+T + S L+ T +T
Sbjct: 3023 PITSSTVVNSSTPITSSTALNTSTPIT 3049
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT 720
PI+SS VNS+T + S L+ T +T
Sbjct: 1379 PITSSTVVNSSTPITSSTVLNSSTPIT 1405
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT 720
PI+SS VNS+T + S L+ T +T
Sbjct: 2219 PITSSTVVNSSTPITSSTVLNSSTPIT 2245
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT 720
PI+SS VNS+T + S L+ T +T
Sbjct: 2507 PITSSTVVNSSTPITSSTVLNSSTPIT 2533
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 640 PISSSLGVNSTTLVVSCVTLSLETXVT 720
PI+SS VNS+T + S L+ T +T
Sbjct: 2555 PITSSTVVNSSTPITSLTALNSSTPIT 2581
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 156 LYNKTNRYFKTRLLTVIEFKMCYLNIIFLTCALLVTSIAQNSSKDAIGFPEMEENPDLRN 335
+Y+ TN +TR + FK C I+F+ + + ++AI E N DL
Sbjct: 140 IYDATNGTRRTRRILYDRFKNCGFKILFIESLCNKEDVINANIQEAIHVSEEFRNWDLEM 199
Query: 336 KE 341
E
Sbjct: 200 AE 201
>SPAC806.08c |mod21||gamma tubulin complex subunit
Mod21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 618
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -1
Query: 430 QSQIQSSFWSPG*NNSLSGHLAGMNTGWRFSLFLKSGFSSISGNPI 293
Q + + S WS + GH +NT F L L F+ + N I
Sbjct: 451 QEEAKKSLWSKRFSRFYYGHYVFVNTCHNFFLTLYQSFTEVDENSI 496
>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
pyridoxine, pyridoxal, and pyridoxamine
Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 27.1 bits (57), Expect = 3.5
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 403 SPG*NNSLSGHLAGMNTGWRFSL-FLKSGFSSISGNPIASFELFCAIDVTNNAHVRNIIF 227
SP NS+ G N W L +L + +SG+ +A+F L I T AHV I+F
Sbjct: 416 SPIVGNSMVTVANGHN--WMCILNYLTDSYPLLSGSAVAAFTLPSFIGATVFAHVSQIMF 473
>SPAC1F5.08c |yam8|ehs1|calcium transport
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 340 SLFLKSGFSSISGNPIASFELFCAID 263
+ F++SG S++ GN + ++EL ID
Sbjct: 128 NFFVESGESTLEGNNVINYELAAGID 153
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = -3
Query: 512 ILSDFTWSLSKSWPAFVCSWVI*VRWSAITNPVVFLVSRI 393
I+S W S+ P + +W++ + + P+++LV+R+
Sbjct: 469 IISPQLWQ-SRDAPRYYPAWIVQIVVAWFVTPIIYLVARV 507
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.8 bits (54), Expect = 8.2
Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +3
Query: 252 LLVTSIAQNSSKDAIGFPEMEENPDLRNKENRQPVFIPARCPDNELFYPGDQKDDWICDC 431
+ TS NS +I PE ++ +L+NK P + N+ P D I
Sbjct: 149 MFTTSRRNNSISGSITIPESDQQINLQNKFLSTP---SIKNNANKSLSPQDSIS--IFGT 203
Query: 432 RPANLYHPGTDK--CW 473
P N Y TD CW
Sbjct: 204 SPFNAYQQNTDNFVCW 219
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,296,209
Number of Sequences: 5004
Number of extensions: 71769
Number of successful extensions: 198
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -