Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_E04
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   1.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   4.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   6.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   6.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   6.5  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   8.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   8.6  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   8.6  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 198 LINAS*NIYSFCYITKMLNNNYSDRQEIKIMLS 100
           ++N + NI+    +  +L    SDRQ  +I+LS
Sbjct: 261 ILNRTNNIFELVTVEPILTERPSDRQRNEILLS 293


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +1

Query: 112 FYFLTVTIVIVEHFCYITKRI 174
           F+F   ++++V   CY T  +
Sbjct: 150 FFFAATSLLVVAEVCYFTAHV 170


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 682 VSCVTLSLETXVTEVIGVLCPPGSRRSVN 768
           V    LS E   ++ + ++CP G R  +N
Sbjct: 593 VPLTALSEEGVQSKDLALICPDGGRAEIN 621


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 682 VSCVTLSLETXVTEVIGVLCPPGSRRSVN 768
           V    LS E   ++ + ++CP G R  +N
Sbjct: 593 VPLTALSEEGVQSKDLALICPDGGRAEIN 621


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 682 VSCVTLSLETXVTEVIGVLCPPGSRRSVN 768
           V    LS E   ++ + ++CP G R  +N
Sbjct: 593 VPLTALSEEGVQSKDLALICPDGGRAEIN 621


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 720 CNXCLKRKRHAAN 682
           CN C ++++H AN
Sbjct: 72  CNKCNEKQKHTAN 84


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 643 ISSSLGVNSTTLVVSCVTLSLETXVTEVIG 732
           I   + VN+TT   + VTLS++    EV G
Sbjct: 168 IPHDIAVNTTTEKGALVTLSVQLLSCEVNG 197


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 720 CNXCLKRKRHAAN 682
           CN C ++++H AN
Sbjct: 72  CNKCNEKQKHTAN 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,396
Number of Sequences: 438
Number of extensions: 5364
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)