Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_D19
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    32   0.47 
AC024877-1|AAF60906.2|  138|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z77657-9|CAB01149.2|  381|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 27/77 (35%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
 Frame = +1

Query: 178 PTQLXSMXPNPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDR 348
           P       PN   +QPT +G G  P    P  V PP  Y   P  +G    DNGA     
Sbjct: 338 PPAYYPQDPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPY 394

Query: 349 PQGRPYFKPTPFPGARG 399
           P G PY    P P   G
Sbjct: 395 PVGPPYPSDVPAPYPSG 411


>AC024877-1|AAF60906.2|  138|Caenorhabditis elegans Hypothetical
           protein Y95B8A.8 protein.
          Length = 138

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
 Frame = +1

Query: 154 PRLGSWKT-PTQLXSMXPNPFFAQP--TVGNGYEPIDNRPYIVNPPKDYNPNGNGYE--- 315
           P  G ++T P+Q   + PNP+F +P      GY+         N PK++   G G +   
Sbjct: 60  PYAGQFQTFPSQATKIAPNPYFKKPQNQQQQGYDAAVYNYAQQNTPKNWKHGGGGRQGRQ 119

Query: 316 -PIDNGAYYVD 345
              DN  YY +
Sbjct: 120 GSGDNKQYYCE 130


>Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 220 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 318
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical
           protein M04G12.4b protein.
          Length = 550

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 220 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 318
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 62  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 90


>Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 220 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 318
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>Z77657-9|CAB01149.2|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.5 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +1

Query: 172 KTPTQLXSMXPNPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPN 300
           KTP  +     N  F  P   N Y+P   + Y VN P  +  N
Sbjct: 269 KTPP-ISQSGQNGSFTSPNYPNNYDPYTEQIYYVNAPTGFQVN 310


>U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical
           protein C30G12.1 protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 287 TTTLMETATNLSTTVHITWTVPKADLTSSLPLS 385
           TTT M T T  ST +  T T P+     ++P S
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,090,212
Number of Sequences: 27780
Number of extensions: 243961
Number of successful extensions: 626
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)