Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_D15
         (806 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0207 + 13017538-13017670,13019486-13019658,13020754-130208...    23   9.0  
02_02_0417 + 9993807-9993868,9994009-9994105,9994223-9994310,999...    23   9.0  

>06_02_0207 +
           13017538-13017670,13019486-13019658,13020754-13020845,
           13022213-13022271,13022659-13022759,13023907-13023988,
           13024092-13024321
          Length = 289

 Score = 23.4 bits (48), Expect(2) = 9.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 773 FFFXXGGGGXGGG 735
           F F  GGGG GGG
Sbjct: 231 FRFGKGGGGGGGG 243



 Score = 23.0 bits (47), Expect(2) = 9.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 758 GGGGXGGGXXXFF 720
           GGGG GGG   +F
Sbjct: 238 GGGGGGGGGSNYF 250


>02_02_0417 +
           9993807-9993868,9994009-9994105,9994223-9994310,
           9995111-9995184,9995985-9996185,9996663-9996744,
           9996829-9997061
          Length = 278

 Score = 23.4 bits (48), Expect(2) = 9.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 773 FFFXXGGGGXGGG 735
           F F  GGGG GGG
Sbjct: 219 FRFGKGGGGGGGG 231



 Score = 23.0 bits (47), Expect(2) = 9.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 758 GGGGXGGGXXXFF 720
           GGGG GGG   +F
Sbjct: 226 GGGGGGGGGSNYF 238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,588,767
Number of Sequences: 37544
Number of extensions: 257149
Number of successful extensions: 3229
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2933
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)