Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_D11
         (915 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    29   0.92 
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    29   0.92 
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po...    27   4.9  
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo...    27   4.9  
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-...    26   6.5  
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl...    26   6.5  

>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 557

 Score = 29.1 bits (62), Expect = 0.92
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = +1

Query: 184 EDYNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 291
           +DYN N  N Y PI N  Y+++   G    PYF     PG
Sbjct: 118 DDYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157


>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1367

 Score = 29.1 bits (62), Expect = 0.92
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 327 NFLRYSLLPTASTRERGRLEVRSALGTVHVIC 232
           NF    ++P  STR+R  + +R   G +H+IC
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLIC 787


>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 658

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 173 TPTQKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 286
           TP  +TTT+      + T +  T T P  + T+ LP++
Sbjct: 118 TPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155


>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
            Wis4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1401

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 213  RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 320
            R + ++C  R P  RP  +     PW + +  K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315


>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
           cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 463

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = +2

Query: 140 PTLKTPLG*WKTPTQK----TTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAVGS 307
           P +K PL   KTP  +    TT L +   + S+++H T++  +  LTS+        V S
Sbjct: 222 PIVKKPLR-QKTPVSRSSDTTTELSKDLISSSSSIHSTYSSAQTGLTSA-------KVSS 273

Query: 308 KEYLRKLIT 334
            EY R++ T
Sbjct: 274 DEYARQVDT 282


>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
           Plh1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 623

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 178 DSEDYNPNGNGYEPIDNGAYYVDRPQGRP 264
           D + Y  +G G +P + G YY + P+G+P
Sbjct: 477 DMKIYCVHGVG-KPTERGYYYTNNPEGQP 504


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,070,856
Number of Sequences: 5004
Number of extensions: 33835
Number of successful extensions: 80
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)