Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_D11
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039047-13|AAM15587.1|  402|Caenorhabditis elegans Coexpressed ...    34   0.16 
U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical pr...    32   0.66 
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    30   2.7  
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical p...    28   8.1  
U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical ...    28   8.1  

>AF039047-13|AAM15587.1|  402|Caenorhabditis elegans Coexpressed
           with polycystins protein4 protein.
          Length = 402

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 125 LCWLWPTLKTPLG*WKTPTQKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 286
           LC+LW  L T      T T  T+ +  T T +      T TVP  + T+++PL+
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLN 232


>U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical
           protein C30G12.1 protein.
          Length = 469

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +2

Query: 170 KTPTQKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 286
           KT  Q TTT M T T  ST +  T T P+     ++P S
Sbjct: 288 KTNPQITTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
           protein F40G12.3 protein.
          Length = 1099

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 176 PTQKTTTLMETATNLSTTVHITWTV 250
           PT+K+TT+  TAT +ST  H T TV
Sbjct: 662 PTEKSTTVDYTATTVSTKSHSTITV 686


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/44 (40%), Positives = 20/44 (45%)
 Frame = +2

Query: 140 PTLKTPLG*WKTPTQKTTTLMETATNLSTTVHITWTVPKADLTS 271
           PT  TP     T T  TTT  ET T  +TT   T T P    T+
Sbjct: 120 PTTTTPT---TTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTT 160


>Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +2

Query: 170 KTPTQKTTTLMETATNLSTT---VHITWTVPKADLTSSLPLSLVLAVGS 307
           KTP   TTT  +T T L TT     ++ T P+   T+++P +  +   S
Sbjct: 102 KTPVPITTTREQTTTTLRTTSASTTLSTTQPQTTTTTTIPSTTTMTESS 150


>U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical
           protein T09D3.3 protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = +2

Query: 143 TLKTPLG*WKTPTQKTTTLMETATNLSTTVHI--TWTVPK--ADLTSSLPLSLVLA 298
           T  TP+    T T+ TTT   T+T+ STT  +  T + PK   +LT   P  L+ A
Sbjct: 470 TTTTPVPVTSTTTEPTTTTYTTSTSTSTTTTLPPTTSTPKIVVNLTPIYPDMLMKA 525


>AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +2

Query: 170 KTPTQKTTTLMETATNLSTT---VHITWTVPKADLTSSLPLSLVLAVGS 307
           KTP   TTT  +T T L TT     ++ T P+   T+++P +  +   S
Sbjct: 102 KTPVPITTTREQTTTTLRTTSASTTLSTTQPQTTTTTTIPSTTTMTESS 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,941,590
Number of Sequences: 27780
Number of extensions: 210446
Number of successful extensions: 558
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)