Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_D06
         (1094 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71178-1|CAA94874.1|  297|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U58737-3|AAM69082.2|  189|Caenorhabditis elegans Hypothetical pr...    29   4.4  

>Z71178-1|CAA94874.1|  297|Caenorhabditis elegans Hypothetical
           protein B0024.1 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +2

Query: 83  LGPPEAQAENPWSPNF-QKMVXPXGXLVNPAWPLPCYCRLTXXKFPNXPP 229
           + PP    ENP++  F QK       L  PAW   C C  T  K P  PP
Sbjct: 65  VSPPSQPKENPFNSVFRQKRRSTFSGL--PAW---CQCEPTKPKCPRGPP 109


>U58737-3|AAM69082.2|  189|Caenorhabditis elegans Hypothetical
           protein ZK54.3 protein.
          Length = 189

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 168 GLTXHPLGXTIFWKFGDQGFSAWAS 94
           G+  +  G +IFWKF D     WA+
Sbjct: 159 GIIAYLFGASIFWKFADANIQPWAT 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,309,200
Number of Sequences: 27780
Number of extensions: 222016
Number of successful extensions: 321
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2950351116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)