Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_D05
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 279 2e-75
Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 279 2e-75
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 279 2e-75
AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical ... 62 4e-10
AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical ... 62 4e-10
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 30 1.9
Z35600-2|CAA84663.1| 394|Caenorhabditis elegans Hypothetical pr... 29 5.9
U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF024499-6|AAB70354.1| 560|Caenorhabditis elegans Hypothetical ... 29 5.9
M11498-1|AAA28163.1| 282|Caenorhabditis elegans protein ( C.ele... 28 7.8
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 7.8
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 7.8
>Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 279 bits (684), Expect = 2e-75
Identities = 136/221 (61%), Positives = 160/221 (72%), Gaps = 2/221 (0%)
Frame = +2
Query: 236 LPRLEELFAKFNAPA--PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKS 409
L LE+L+ KF+ P P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKS
Sbjct: 46 LTPLEQLYEKFHGPQAKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKS 105
Query: 410 IEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPS 589
IE S+V KGGKI KVP D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP
Sbjct: 106 IEASFVVKGGKIYKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPH 165
Query: 590 TANMQSLYDKFGLDRNTQDFTGHALALYLDDNYLQQPAIQTIRRIKLYSDSLAXXXXXXX 769
+ MQ +Y+KFGLD NT DFTGHALALY DD + QP + +I+LYSDSLA
Sbjct: 166 NSTMQQVYEKFGLDENTADFTGHALALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPY 225
Query: 770 XXXXXXXXXXXQGFARLSAIYGGTYILDKPIN*IVLGKDGK 892
QGFARLSAIYGGTY+LDKP++ IV+ ++GK
Sbjct: 226 LYPLYGLGELPQGFARLSAIYGGTYMLDKPVDEIVM-ENGK 265
Score = 97.9 bits (233), Expect = 9e-21
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 100 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITP 243
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TP
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTP 48
>Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 279 bits (684), Expect = 2e-75
Identities = 136/221 (61%), Positives = 160/221 (72%), Gaps = 2/221 (0%)
Frame = +2
Query: 236 LPRLEELFAKFNAPA--PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKS 409
L LE+L+ KF+ P P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKS
Sbjct: 46 LTPLEQLYEKFHGPQAKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKS 105
Query: 410 IEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPS 589
IE S+V KGGKI KVP D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP
Sbjct: 106 IEASFVVKGGKIYKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPH 165
Query: 590 TANMQSLYDKFGLDRNTQDFTGHALALYLDDNYLQQPAIQTIRRIKLYSDSLAXXXXXXX 769
+ MQ +Y+KFGLD NT DFTGHALALY DD + QP + +I+LYSDSLA
Sbjct: 166 NSTMQQVYEKFGLDENTADFTGHALALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPY 225
Query: 770 XXXXXXXXXXXQGFARLSAIYGGTYILDKPIN*IVLGKDGK 892
QGFARLSAIYGGTY+LDKP++ IV+ ++GK
Sbjct: 226 LYPLYGLGELPQGFARLSAIYGGTYMLDKPVDEIVM-ENGK 265
Score = 97.9 bits (233), Expect = 9e-21
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 100 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITP 243
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TP
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTP 48
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 279 bits (684), Expect = 2e-75
Identities = 136/221 (61%), Positives = 160/221 (72%), Gaps = 2/221 (0%)
Frame = +2
Query: 236 LPRLEELFAKFNAPA--PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKS 409
L LE+L+ KF+ P P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKS
Sbjct: 46 LTPLEQLYEKFHGPQAKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKS 105
Query: 410 IEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPS 589
IE S+V KGGKI KVP D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP
Sbjct: 106 IEASFVVKGGKIYKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPH 165
Query: 590 TANMQSLYDKFGLDRNTQDFTGHALALYLDDNYLQQPAIQTIRRIKLYSDSLAXXXXXXX 769
+ MQ +Y+KFGLD NT DFTGHALALY DD + QP + +I+LYSDSLA
Sbjct: 166 NSTMQQVYEKFGLDENTADFTGHALALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPY 225
Query: 770 XXXXXXXXXXXQGFARLSAIYGGTYILDKPIN*IVLGKDGK 892
QGFARLSAIYGGTY+LDKP++ IV+ ++GK
Sbjct: 226 LYPLYGLGELPQGFARLSAIYGGTYMLDKPVDEIVM-ENGK 265
Score = 97.9 bits (233), Expect = 9e-21
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 100 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITP 243
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TP
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTP 48
>AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical
protein Y67D2.1b protein.
Length = 353
Score = 62.5 bits (145), Expect = 4e-10
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 8/204 (3%)
Frame = +2
Query: 305 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 469
R +++DL+PK L++ G +V+ L + V+ Y EFK + G ++ VP +
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181
Query: 470 EALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTAN--MQSLYDKFGLDRNTQ 643
E S+ + + EKR F+ + + +D + + A+ ++ G+ + Q
Sbjct: 182 EIFQSNALSILEKRALMKFITFCTQWSTKDTEEGRKLLAEHADRPFSEFLEQMGVGKTLQ 241
Query: 644 DFTGHALALYLDDNYLQQPAIQT-IRRIKLYSDSLAXXXXXXXXXXXXXXXXXXQGFARL 820
F + + + Q+P T + + DS+ Q F RL
Sbjct: 242 SFIINTIGI-----LQQRPTAMTGMLASCQFMDSVGHFGPSPFLFPLYGCGELSQCFCRL 296
Query: 821 SAIYGGTYILDKPIN*IVLGKDGK 892
+A++G Y L +P+ IV KDGK
Sbjct: 297 AAVFGSLYCLGRPVQAIV-KKDGK 319
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 100 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 240
+ E DV+VLGTGL E IL+ + +G VLH+DRN+YYGG+ +S T
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51
>AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical
protein Y67D2.1a protein.
Length = 510
Score = 62.5 bits (145), Expect = 4e-10
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 8/204 (3%)
Frame = +2
Query: 305 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 469
R +++DL+PK L++ G +V+ L + V+ Y EFK + G ++ VP +
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181
Query: 470 EALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTAN--MQSLYDKFGLDRNTQ 643
E S+ + + EKR F+ + + +D + + A+ ++ G+ + Q
Sbjct: 182 EIFQSNALSILEKRALMKFITFCTQWSTKDTEEGRKLLAEHADRPFSEFLEQMGVGKTLQ 241
Query: 644 DFTGHALALYLDDNYLQQPAIQT-IRRIKLYSDSLAXXXXXXXXXXXXXXXXXXQGFARL 820
F + + + Q+P T + + DS+ Q F RL
Sbjct: 242 SFIINTIGI-----LQQRPTAMTGMLASCQFMDSVGHFGPSPFLFPLYGCGELSQCFCRL 296
Query: 821 SAIYGGTYILDKPIN*IVLGKDGK 892
+A++G Y L +P+ IV KDGK
Sbjct: 297 AAVFGSLYCLGRPVQAIV-KKDGK 319
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 100 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 240
+ E DV+VLGTGL E IL+ + +G VLH+DRN+YYGG+ +S T
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 106 EEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 234
+ YD I++G G + L+ +GKKV ++R GG + +
Sbjct: 13 QSYDAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVT 55
>Z35600-2|CAA84663.1| 394|Caenorhabditis elegans Hypothetical
protein F37A8.2 protein.
Length = 394
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +2
Query: 182 RRFCTSIAISTTVVNLRQLPRLEELFAKFNAPAPDETYGRGRDWNVDL 325
R + T+ I + + +L + P+ EL +AP TY W+V++
Sbjct: 73 RNYSTNPLIPSYICDLCESPKTSELRVAHDAPTFQTTYSYSISWDVEM 120
>U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical
protein ZC196.3 protein.
Length = 441
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 461 DQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDP-STANMQSLYDKFGL 628
++KE +D + K+ + FL Y +DFQ A+ WK F + ++Q Y++ +
Sbjct: 253 EEKEEKVADWIQNCYKQPIKRFLEYFRDFQNV-AREWKYFKRLPSESLQDAYEEISI 308
>AF024499-6|AAB70354.1| 560|Caenorhabditis elegans Hypothetical
protein F42G2.2 protein.
Length = 560
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 690 K*LSSK*RARACPVKSWVFLSNPNLSYSD 604
K L++K R C + +W ++ +P+ SYSD
Sbjct: 269 KVLNNKRELRRCTMGNWFYIVHPDYSYSD 297
>M11498-1|AAA28163.1| 282|Caenorhabditis elegans protein (
C.elegans vitellogenin4 (yp170A) gene. ).
Length = 282
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Frame = +2
Query: 389 RYLEFKSIE----GSYVYKGGKISKVPVDQKEALASDLMGMFE---KRRFRNFLIYVQDF 547
RY+ + I+ S++ + + K+ ++ L+ +L + E + + RN L+ F
Sbjct: 66 RYIHLQLIDIQYSASHIPQSEQWPKIESLEQRELSDELKELLELPFRAQIRNGLVSEIQF 125
Query: 548 QEEDAKTWKDFDPSTANMQSLYDKFGLDRNTQD 646
EDA+ K+ S N+ SL +D +QD
Sbjct: 126 SSEDAEWSKNAKRSILNLFSLRKSAPVDEMSQD 158
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Frame = +2
Query: 389 RYLEFKSIE----GSYVYKGGKISKVPVDQKEALASDLMGMFE---KRRFRNFLIYVQDF 547
RY+ + I+ S++ + + K+ ++ L+ +L + E + + RN L+ F
Sbjct: 66 RYIHLQLIDIQYSASHIPQSEQWPKIKSLEQRELSDELKELLELPFRAQIRNGLVSEIQF 125
Query: 548 QEEDAKTWKDFDPSTANMQSLYDKFGLDRNTQD 646
EDA+ K+ S N+ SL +D +QD
Sbjct: 126 SSEDAEWSKNAKRSILNLFSLRKSAPVDEMSQD 158
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Frame = +2
Query: 389 RYLEFKSIE----GSYVYKGGKISKVPVDQKEALASDLMGMFE---KRRFRNFLIYVQDF 547
RY+ + I+ S++ + + K+ ++ L+ +L + E + + RN L+ F
Sbjct: 66 RYIHLQLIDIQYSASHIPQSEQWPKIESLEQRELSDELKELLELPFRAQIRNGLVSEIQF 125
Query: 548 QEEDAKTWKDFDPSTANMQSLYDKFGLDRNTQD 646
EDA+ K+ S N+ SL +D +QD
Sbjct: 126 SSEDAEWSKNAKRSILNLFSLRKSAPVDEMSQD 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,834,786
Number of Sequences: 27780
Number of extensions: 455212
Number of successful extensions: 1079
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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