Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_D04
(906 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.053
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.053
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.053
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 34 0.16
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.65
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.65
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 0.86
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 0.86
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.5
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 29 4.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.6
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 29 4.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 6.0
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 6.0
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 6.0
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 6.0
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 29 6.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.0
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 28 8.0
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.053
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 641 GGXPPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPP 528
GG PPP PPPPPP T PPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 643 GGGXPPPXXXXXXPPPPP 590
GG PPP PPPPP
Sbjct: 286 GGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.053
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 641 GGXPPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPP 528
GG PPP PPPPPP T PPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 643 GGGXPPPXXXXXXPPPPP 590
GG PPP PPPPP
Sbjct: 307 GGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.053
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 641 GGXPPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPP 528
GG PPP PPPPPP T PPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 643 GGGXPPPXXXXXXPPPPP 590
GG PPP PPPPP
Sbjct: 292 GGSPPPPRAGSPPPPPPP 309
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 575 FXXXXGGGGGGXXXXXXGGXPPPPXKXXGXFXXPPPP 685
F GGGGGG PPP G PPPP
Sbjct: 20 FPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPP 56
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 590 GGGGGGXXXXXXGGXPPPPXKXXGXFXXPPPP 685
GGGGG PPPP PPPP
Sbjct: 27 GGGGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPPP 522
P P PPPPPP T PPPPP
Sbjct: 487 PQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 684 GGGGXKKXPXXFXGGGGXPPXXXKXXPPPPP 592
G GG P F GG PP PPPPP
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 31.5 bits (68), Expect = 0.86
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 641 GGXPPPXXXXXXPPPPPP 588
GG PPP PPPPPP
Sbjct: 102 GGIPPPPPMFGAPPPPPP 119
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 643 GGGXPPPXXXXXXPPPPPP 587
GG PPP PPPPPP
Sbjct: 102 GGIPPPPPMFGAPPPPPPP 120
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 684 GGGGXKKXPXXFXGGGGXPPXXXKXXPPPPPP 589
GGGG GGGG PPPPPP
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 682 GGGXXKXXXXFXXGGGXPPPXXXXXXPPPPPP 587
GGG GGG P PPPPPP
Sbjct: 279 GGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 684 GGGGXKKXPXXFXGGGGXPPXXXKXXPPPPPP 589
GGGG GGG PPPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 684 GGGGXKKXPXXFXGGGGXPPXXXKXXPPPPPP 589
GGGG GGGG PPPPPP
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 682 GGGXXKXXXXFXXGGGXPPPXXXXXXPPPPPP 587
GGG GGG P PPPPPP
Sbjct: 279 GGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 684 GGGGXKKXPXXFXGGGGXPPXXXKXXPPPPPP 589
GGGG GGG PPPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPPP 522
PPP PPPPP + PPPPP
Sbjct: 64 PPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPP 100
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPP 525
PPP PPPPP + PPPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPP 68
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPP 525
PPP PPPPP + PPPP
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPP 131
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPP 525
PPP PPPPP + PPPP
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPP 162
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPP 525
PPP PPPPP + PPPP
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPP 193
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPP 525
PPP PPPPP + PPPP
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPP 224
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPP 525
PPP PPPPP + PPPP
Sbjct: 251 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPP 286
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.5 bits (68), Expect = 0.86
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 641 GGXPPPXXXXXXPPPPPP 588
GG PPP PPPPPP
Sbjct: 787 GGIPPPPPLGIIPPPPPP 804
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.5 bits (68), Expect = 0.86
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 641 GGXPPPXXXXXXPPPPPP 588
GG PPP PPPPPP
Sbjct: 787 GGIPPPPPLGIIPPPPPP 804
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 641 GGXPPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPPP 522
GG PP PPPPP PPPPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 643 GGGXPPPXXXXXXPPPPPP 587
GG PPP PPPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPPP 522
PPP PPPPPP K PPPPP
Sbjct: 763 PPPGGCPPPPPPPPPGGFK---------GGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 626 GGXPPPPXKXXGXFXXPPPP 685
GG PPPP G PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPP 775
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 639 GGXPPXXXKXXPPPPPP 589
GG PP PPPPPP
Sbjct: 749 GGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 641 GGXPPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPPP 522
GG PP PPPPP PPPPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 643 GGGXPPPXXXXXXPPPPPP 587
GG PPP PPPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPPP 522
PPP PPPPPP K PPPPP
Sbjct: 763 PPPGGCPPPPPPPPPGGFK---------GGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 626 GGXPPPPXKXXGXFXXPPPP 685
GG PPPP G PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPP 775
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 639 GGXPPXXXKXXPPPPPP 589
GG PP PPPPPP
Sbjct: 749 GGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 641 GGXPPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPPP 522
GG PP PPPPP PPPPP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 643 GGGXPPPXXXXXXPPPPPP 587
GG PPP PPPPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPP 357
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPPP 522
PPP PPPPPP K PPPPP
Sbjct: 346 PPPGGCPPPPPPPPPGGFK---------GGPPPPPPP 373
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 626 GGXPPPPXKXXGXFXXPPPP 685
GG PPPP G PPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPP 358
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 639 GGXPPXXXKXXPPPPPP 589
GG PP PPPPPP
Sbjct: 332 GGLPPISGGPPPPPPPP 348
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPP 525
PPP PPPPPP +T PPPP
Sbjct: 288 PPPPSSGMWPPPPPP-PPGRTPGPPGMPGMPPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPP 525
PPP PPPPPP +T PPPP
Sbjct: 298 PPPPSSGMWPPPPPP-PPGRTPGPPGMPGMPPPPPP 332
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 660 PXXFXGGGGXPPXXXKXXPPPPPP 589
P F G G P + PPPPPP
Sbjct: 594 PQQFQGNQGVNPSGQQSGPPPPPP 617
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 660 PXXFXGGGGXPPXXXKXXPPPPPP 589
P F G G P + PPPPPP
Sbjct: 919 PQQFQGNQGVNPSGQQSGPPPPPP 942
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 605 PPPPPPXXXKKTXXXXXXXXXXXPPPPP 522
PPPPPP + PPPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPP 636
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 605 PPPPPPXXXKKTXXXXXXXXXXXPPPPP 522
PPPPPP + PPPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPP 462
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 660 PXXFXGGGGXPPXXXKXXPPPPPP 589
P F G G P + PPPPPP
Sbjct: 919 PQQFQGNQGVNPSGQQSGPPPPPP 942
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 525 GGGGGXXXXXXXXXXXFFXXXGGGGGGXXXXXXGGGXPPP 644
GGGGG GGGGG GGG PP
Sbjct: 73 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPP 112
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 525 GGGGGXXXXXXXXXXXFFXXXGGGGGGXXXXXXGGGXPPP 644
GGGGG GGGG G GG PPP
Sbjct: 74 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPP 113
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 528 GGGGXXXXXXXXXXXFFXXXGGGGGGXXXXXXGGGXPPPXXKXXXFFXXPPP 683
GGGG GGGGGG GG P + PPP
Sbjct: 109 GGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPP 160
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 573 FFXXXGGGGGGXXXXXXGGGXPPP 644
FF GGGGGG G G P P
Sbjct: 20 FFGMGGGGGGGGGGCCCGCGTPQP 43
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 590 GGGGGGXXXXXXGGXPPPPXKXXGXFXXPPP 682
GGGGGG G PPPP P P
Sbjct: 82 GGGGGGGYGRPQGYVPPPPPPPTQPEPEPEP 112
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 573 FFXXXGG--GGGGXXXXXXGGGXPPP 644
+F GG GGGG GGG PPP
Sbjct: 20 YFGVGGGPAGGGGGNKSAGGGGAPPP 45
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 591 GGGGGXXXXXXGGGXPPPXXKXXXFFXXPP 680
G GGG GGG PP +F PP
Sbjct: 68 GVGGGPVGGGGGGGAPPAASNDAGYFATPP 97
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 525 GGGGGXXXXXXXXXXXFFXXXGGGGGGXXXXXXGGG 632
GGGGG GGGGGG GGG
Sbjct: 89 GGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGG 124
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 525 GGGGGXXXXXXXXXXXFFXXXGGGGGGXXXXXXGGG 632
GGGGG GGGGGG GGG
Sbjct: 114 GGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGG 149
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 525 GGGGGXXXXXXXXXXXFFXXXGGGGGGXXXXXXGGG 632
GGGGG GGGGGG GGG
Sbjct: 135 GGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGG 170
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = -2
Query: 632 PPPXXXXXXPPPPPPXXXKKTXXXXXXXXXXXPPPP 525
PPP PPPPP + PPPP
Sbjct: 1346 PPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 572 FFXXXXGGGGGGXXXXXXGGXPPPPXKXXGXFXXPPPP 685
F G G GG GG P P F PPPP
Sbjct: 17 FLLGGSGCGCGGPSLSLCGGCAPRPRVAAPPFAPPPPP 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,366,068
Number of Sequences: 27780
Number of extensions: 295460
Number of successful extensions: 4856
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -