Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_D03
         (906 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   2.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   2.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.8  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   6.7  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   6.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   8.8  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -3

Query: 586 WMXVXPPLGVXXRSPXSNDRXHXXRDRGSXSAPYXQTASL 467
           WM   PP G+    P ++D+       G   A    T SL
Sbjct: 330 WMTYMPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSL 369


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -3

Query: 586 WMXVXPPLGVXXRSPXSNDRXHXXRDRGSXSAPYXQTASL 467
           WM   PP G+    P ++D+       G   A    T SL
Sbjct: 330 WMTYMPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSL 369


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 679 HRLRPPDXHHKKSTP 723
           H + PP  HH  S P
Sbjct: 511 HHVAPPSGHHASSAP 525


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 676 NHRLRPPDXHHKKSTPQXXPWXKPDP 753
           N +L+P +  HK   P+   + +P P
Sbjct: 59  NFQLKPYNPEHKPPGPKDLVYLEPSP 84


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 676 NHRLRPPDXHHKKSTPQXXPWXKPDP 753
           N +L+P +  HK   P+   + +P P
Sbjct: 60  NFQLKPYNPEHKPPGPKDLVYLEPSP 85


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 514 GXXAXGRSXAASGXRHPXAGXRSS 585
           G  A  R+  ASG R   +G RSS
Sbjct: 24  GSNALSRNVEASGQRSVSSGFRSS 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,949
Number of Sequences: 438
Number of extensions: 1352
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)