Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_C24
(894 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.17
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.39
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.51
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.51
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.89
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.89
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 2.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.7
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 6.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 473 PVXXYXXXPPPPRPHXXXXSXPPPPXPXP 387
P PPPP P + PPPP P P
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 681 PXPPPXXKTPXTXXGXXXPPPQHXXRXGPXXXXPPXNTQKXPPXXPXXXPP 833
P PPP P PP GP PP P P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.29
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPPXPXP 387
PPPP P PPPP P P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 451 PXPPPGRIXXTXXXPPPPXPGPXPXXG 371
P PPP I T P P P P P G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMG 759
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 444 PPPAASXXPIXPPPPXPXAPXPXP 373
P PA + P+ PP P P P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Frame = -1
Query: 462 LRXXPXPPPAA-----SXXPIXPPPPXPXAPXPXP 373
L+ P PPPA + PI PPP P P P
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP 763
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 450 PXPPPAASXXPIXPPPPXPXAPXPXP 373
P PPPA PPPP P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGP 775
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPPXPXPLP 381
PPPP P + P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP 754
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.39
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Frame = +3
Query: 690 PPXXKTPXTXXGXXXPPPQHXXRXG---PXXXXPPXNTQKXPPXXPXXXPP-QKXAPXKX 857
PP P T PP R P P K PP PP Q AP K
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 858 PP 863
PP
Sbjct: 184 PP 185
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -1
Query: 444 PPPAASXXPIXPPPPXPXAPXPXP 373
PPPA P+ PP P P P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVP 195
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.51
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPPXP 393
PPPP P S PPPP P
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPPXPXP 387
PPPP P PPP P P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 451 PXPPPGRIXXTXXXPPPPXPG 389
P PPP PPPP PG
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPG 31
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.51
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 450 PXPPPAASXXPIXPPPPXPXAPXP 379
P P PAA P+ PP P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -2
Query: 473 PVXXYXXXPPPPRPHXXXXSXPPPPXPXPLPLXRXG 366
PV PP P+P PPP P+P G
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = -1
Query: 474 PRDXLRXXPXPPPAASXXPIXPPPPXPXAPXP 379
P+ + P P P+ + P+ P P P P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 734 PPPXTXGEXRSXXXXPPPQHPEXXXPXPXPXXPPKXGPXXGPPXXHXTXG 883
PPP E PPP H E P P + G PP H G
Sbjct: 221 PPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 269
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 734 PPPXTXGEXRSXXXXPPPQHPEXXXPXPXPXXPPKXGPXXGPPXXHXTXG 883
PPP E PPP H E P P + G PP H G
Sbjct: 234 PPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 282
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 734 PPPXTXGEXRSXXXXPPPQHPEXXXPXPXPXXPPKXGPXXGPPXXHXTXG 883
PPP E PPP H E P P + G PP H G
Sbjct: 247 PPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 295
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 734 PPPXTXGEXRSXXXXPPPQHPEXXXPXPXPXXPPKXGPXXGPPXXHXTXG 883
PPP E PPP H E P P + G PP H G
Sbjct: 260 PPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 308
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 734 PPPXTXGEXRSXXXXPPPQHPEXXXPXPXPXXPPKXGPXXGPPXXHXTXG 883
PPP E PPP H E P P + G PP H G
Sbjct: 273 PPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 321
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 734 PPPXTXGEXRSXXXXPPPQHPEXXXPXPXPXXPPKXGPXXGPPXXHXTXG 883
PPP E PPP H E P P + G PP H G
Sbjct: 286 PPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 334
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +2
Query: 737 PPXTXGEXRSXXXXPPPQHPEXXXPXPXPXXPPKXGPXXGPPXXHXTXG 883
PP PPP H E P P + G PP H G
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 256
Score = 26.2 bits (55), Expect = 6.3
Identities = 20/73 (27%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +3
Query: 657 AHRXXDXXPXPPPXXKTPXTXXGXXXPPPQHXXRXGPXXXXPPXNTQ--KXPPXXPXXXP 830
AH PPP P G PPP G PP + + + P P
Sbjct: 199 AHHEPGEHMPPPPMHHKP----GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 254
Query: 831 PQKXAPXKXPPXH 869
P + P PP H
Sbjct: 255 PGEHMP--PPPMH 265
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPP 399
PPPP H PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPP 224
Score = 26.2 bits (55), Expect = 6.3
Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +3
Query: 660 HRXXDXXPXPPPXXKTPXTXXGXXXPPPQHXXRXGPXXXXPPXNTQ--KXPPXXPXXXPP 833
H+ + P PPP P G PPP G PP + + + P P P
Sbjct: 214 HKPGEHMP-PPPMHHEP----GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Query: 834 QKXAPXKXPPXH 869
+ P PP H
Sbjct: 269 GEHMP--PPPMH 278
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPP 399
PPPP H PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPP 237
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPP 399
PPPP H PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPP 250
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPP 399
PPPP H PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPP 263
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPP 399
PPPP H PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPP 276
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPP 399
PPPP H PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPP 289
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPP 399
PPPP H PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPP 302
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPP 399
PPPP H PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPP 315
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPP 399
PPPP H PPPP
Sbjct: 312 PPPPMHHEPGEHMPPPP 328
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 449 PPPPRPHXXXXSXPPPP 399
PPPP H PPPP
Sbjct: 325 PPPPMHHEPGEHMPPPP 341
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.89
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 779 PPPQHPEXXXPXPXPXXPPKXGPXXGPP 862
PP + P P P P PP G PP
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPP 268
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -1
Query: 450 PXPPPAASXXPIXPP-PPXPXAPXPXP 373
P PP + P PP PP AP P P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAP 480
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 450 PXPPPAASXXPIXPPPPXPXAPXP 379
P PP + P PPPP P + P
Sbjct: 1718 PSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Frame = -2
Query: 473 PVXXYXXXPPP---PRPHXXXXSXPPPPXPXPLP 381
PV PP P P S PPPP P+P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = -1
Query: 861 GGPXXGPX----FGGXXGXGXGXXXSGCXGGGXXXXDLXSPXVXGGG 733
GGP GP FGG G G G GGG + P GGG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFE-GGPGGFGGG 243
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 368 PXGXGXGAXGXGG--GGXXGXXDAAGGGXG 451
P G G G G GG GG G GGG G
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 374 GXGXGAXGXGG--GGXXGXXDAAGGGXGXXRNXSRG 475
G G G GG GG G GG G R +RG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG 45
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,623,155
Number of Sequences: 5004
Number of extensions: 22016
Number of successful extensions: 315
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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