Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_C23
         (947 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   160   2e-39
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    64   1e-10

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  160 bits (388), Expect = 2e-39
 Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
 Frame = +2

Query: 233 FAKQGFKLVGLKXVWPSEELLQQHYSDLASRPFFPGLXKYMSXGPVVPMVWEGLNVVKTG 412
           F ++G+KLV LK +  S+  L+ HY DL  +PFFP L +YMS GPVV MVW+GL+VVK G
Sbjct: 28  FEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSLIEYMSSGPVVAMVWQGLDVVKQG 87

Query: 413 RQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAXKEIGLWFTDXEVVGW-TPAN 589
           R MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+SA +EI  WF   E+  + +P  
Sbjct: 88  RSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVDSANREIAHWFKQEEINDYASPFI 147

Query: 590 ENWVYE 607
            +WVYE
Sbjct: 148 NSWVYE 153


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 36/79 (45%), Positives = 46/79 (58%)
 Frame = +2

Query: 323 RPFFPGLXKYMSXGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNII 502
           +PFFP L  YMS GPVV M+WEG +VVK  R +LG       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 503 HGSDSVESAXKEIGLWFTD 559
           H SDSV SA +E  LWF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,456,939
Number of Sequences: 27780
Number of extensions: 260004
Number of successful extensions: 610
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)