Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_C22
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82282-8|CAB05278.1|  575|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical p...    29   4.4  
Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical p...    29   4.4  
Z70750-8|CAA94743.1|  300|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AF067624-3|AAM81100.2|  678|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z82282-8|CAB05278.1|  575|Caenorhabditis elegans Hypothetical
           protein T07G12.11 protein.
          Length = 575

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 846 YSLFNHSQVIYSRTIHHPEVACEEIGFELIRVGAVFFGKIFKYEL 712
           YS   H Q+ Y     HPEV C+  GF + +V  + F ++  ++L
Sbjct: 482 YSCSTHPQMKYHYQKMHPEVRCD--GFNIQKVFNIEFDEVAIFDL 524


>Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK1320.12b protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -2

Query: 858 KXHNYSLFNHSQVIYSRTIHHPEVACEEIGFELIRVGAVFFGKIFKYELLSVL 700
           K +  S F+  Q+I + T+H PE+   E   + +R+G       + YE L  L
Sbjct: 139 KVNQLSDFHQDQIISALTVHAPEIIPPEAKNQALRIGTPRPHPSYVYEWLPPL 191


>Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK1320.12a protein.
          Length = 495

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -2

Query: 858 KXHNYSLFNHSQVIYSRTIHHPEVACEEIGFELIRVGAVFFGKIFKYELLSVL 700
           K +  S F+  Q+I + T+H PE+   E   + +R+G       + YE L  L
Sbjct: 139 KVNQLSDFHQDQIISALTVHAPEIIPPEAKNQALRIGTPRPHPSYVYEWLPPL 191


>Z70750-8|CAA94743.1|  300|Caenorhabditis elegans Hypothetical
           protein C50F4.8 protein.
          Length = 300

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = -3

Query: 257 SSLAASYLDTHPVA*TPLLKRHTKRYRAETITLLKR-----AIGTNVADQMVSHPTXV 99
           +S+    LDT+ VA  P +    K YR  T ++  +     A   +VADQ +SHP  V
Sbjct: 218 ASMEKMALDTNAVAKWPQVCADIKTYRMPTPSIPPKNTDVVAQSNSVADQPISHPKLV 275


>AF067624-3|AAM81100.2|  678|Caenorhabditis elegans Hypothetical
           protein M01B12.4c protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +2

Query: 617 PHENQEQTARRYSKESXDCSFELPRTGPSTESSSYLKIFPKKTAPTRINSKPISSQATSG 796
           P  + E+TA + S ES   +  L R    T SSS  +I  +K      N    +S++T G
Sbjct: 619 PSASTEETAEKASNESGRANDVLARVAAMTNSSSLQRILQRKQGS---NPSLQTSESTGG 675


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,184,616
Number of Sequences: 27780
Number of extensions: 454801
Number of successful extensions: 1186
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)