Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_C18
         (828 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   1.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   1.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   8.0  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 294 CLMTAIAGPAXINPSRTLRPTFSIFLKSFHLGSGAALTA 178
           CL   +  PA   PS++L   F I   +F  GSG  + A
Sbjct: 105 CLYLNVYVPADRTPSQSLPVIFWIHGGAFQFGSGIPMGA 143


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 294 CLMTAIAGPAXINPSRTLRPTFSIFLKSFHLGSGAALTA 178
           CL   +  PA   PS++L   F I   +F  GSG  + A
Sbjct: 105 CLYLNVYVPADRTPSQSLPVIFWIHGGAFQFGSGIPMGA 143


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 217 EEFPPGLRSSADRAESQHQREDEAQNT 137
           +EFP    S  +R  S HQR   + NT
Sbjct: 102 KEFPNSSSSDDERPNSIHQRASFSLNT 128


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/26 (34%), Positives = 9/26 (34%)
 Frame = +2

Query: 734 GGXXPXXGGGXXPPXKKKXXXGGXPP 811
           GG  P   G   PP        G PP
Sbjct: 406 GGQLPPSAGAPMPPIPNMSNMSGMPP 431


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 271 TRXD*SIANVASHFLNFLEEFPPGLRSSADRAESQHQREDE 149
           TR   S+A  A   L       PG+    + A   ++ EDE
Sbjct: 400 TRSGYSVARFAETALGAAALVAPGMEEPTNTASGSNEDEDE 440


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,757
Number of Sequences: 438
Number of extensions: 3463
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)