Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_C13
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.91 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.91 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.5  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 112 SRRSKLNQPTXWLAS 156
           +RRS L+QP  WLAS
Sbjct: 216 ARRSNLSQPFQWLAS 230


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 112 SRRSKLNQPTXWLAS 156
           +RRS L+QP  WLAS
Sbjct: 306 ARRSNLSQPFQWLAS 320


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 181 PSXQFWLVGRRAXTWVGS 128
           PS Q WLVG  A + VG+
Sbjct: 4   PSHQVWLVGLLAFSLVGA 21


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 181 PSXQFWLVGRRAXTWVGS 128
           PS Q WLVG  A + VG+
Sbjct: 4   PSHQVWLVGLLAFSLVGA 21


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +1

Query: 694 PPXXGAPPPXXFFXXXXKXXPPPPPLP 774
           PP  GAP P           PP P +P
Sbjct: 410 PPSAGAPMPPIPNMSNMSGMPPLPNMP 436


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,842
Number of Sequences: 438
Number of extensions: 6174
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)