Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_C11
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X61499-1|CAA43716.1| 415|Homo sapiens NF-kB subunit protein. 57 1e-07
X61498-1|CAA43715.1| 933|Homo sapiens NF-kB subunit protein. 57 1e-07
U20816-1|AAA68171.1| 220|Homo sapiens nuclear factor kappa-B2 p... 57 1e-07
U09609-1|AAA21462.2| 669|Homo sapiens p80HT protein. 57 1e-07
S76638-1|AAB21124.1| 900|Homo sapiens p50-NF-kappa B homolog pr... 57 1e-07
BT009769-1|AAP88771.1| 899|Homo sapiens nuclear factor of kappa... 57 1e-07
BC002844-1|AAH02844.1| 899|Homo sapiens nuclear factor of kappa... 57 1e-07
AY865619-1|AAW56071.1| 900|Homo sapiens nuclear factor of kappa... 57 1e-07
AL121928-1|CAC08399.1| 900|Homo sapiens nuclear factor of kappa... 57 1e-07
Z47748-1|CAB94757.1| 969|Homo sapiens NFKB1 protein. 54 9e-07
Z22948-1|CAA80524.2| 550|Homo sapiens p65 subunit of transcript... 54 9e-07
M58603-1|AAA36360.1| 968|Homo sapiens nuclear factor kappa-B DN... 54 9e-07
M55643-1|AAA36361.1| 969|Homo sapiens factor KBF1 protein. 54 9e-07
BC051765-1|AAH51765.1| 969|Homo sapiens nuclear factor of kappa... 54 9e-07
AY223820-1|AAO30127.1| 968|Homo sapiens nuclear factor of kappa... 54 9e-07
AF213884-1|AAF35232.1| 968|Homo sapiens nuclear factor of kappa... 54 9e-07
M62399-1|AAA36408.1| 551|Homo sapiens NF-kappa-B transcription ... 53 1e-06
BC110830-1|AAI10831.1| 377|Homo sapiens RELA protein protein. 53 1e-06
BC033522-1|AAH33522.1| 548|Homo sapiens RELA protein protein. 53 1e-06
BC014095-1|AAH14095.1| 246|Homo sapiens RELA protein protein. 53 1e-06
BC011603-1|AAH11603.1| 220|Homo sapiens RELA protein protein. 53 1e-06
L19067-1|AAA20946.1| 537|Homo sapiens NF-kappa-B transcription ... 44 6e-04
AY455868-1|AAR13863.1| 534|Homo sapiens v-rel reticuloendotheli... 43 0.001
>X61499-1|CAA43716.1| 415|Homo sapiens NF-kB subunit protein.
Length = 415
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L I+EQP Q FRFRY E +HG L G SS + K +PTV++ NY G A I+ L
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCE-GPSHGGLPGASSEKGR-KTYPTVKICNYEGPAKIEVDL 95
Query: 735 XQHK-TPEEHPHKL 773
H P H H L
Sbjct: 96 VTHSDPPRAHAHSL 109
>X61498-1|CAA43715.1| 933|Homo sapiens NF-kB subunit protein.
Length = 933
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L I+EQP Q FRFRY E +HG L G SS + K +PTV++ NY G A I+ L
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCE-GPSHGGLPGASSEKGR-KTYPTVKICNYEGPAKIEVDL 95
Query: 735 XQHK-TPEEHPHKL 773
H P H H L
Sbjct: 96 VTHSDPPRAHAHSL 109
>U20816-1|AAA68171.1| 220|Homo sapiens nuclear factor kappa-B2
protein.
Length = 220
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L I+EQP Q FRFRY E +HG L G SS + K +PTV++ NY G A I+ L
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCE-GPSHGGLPGASSEKGR-KTYPTVKICNYEGPAKIEVDL 95
Query: 735 XQHK-TPEEHPHKL 773
H P H H L
Sbjct: 96 VTHSDPPRAHAHSL 109
>U09609-1|AAA21462.2| 669|Homo sapiens p80HT protein.
Length = 669
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L I+EQP Q FRFRY E +HG L G SS + K +PTV++ NY G A I+ L
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCE-GPSHGGLPGASSEKGR-KTYPTVKICNYEGPAKIEVDL 95
Query: 735 XQHK-TPEEHPHKL 773
H P H H L
Sbjct: 96 VTHSDPPRAHAHSL 109
>S76638-1|AAB21124.1| 900|Homo sapiens p50-NF-kappa B homolog
protein.
Length = 900
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L I+EQP Q FRFRY E +HG L G SS + K +PTV++ NY G A I+ L
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCE-GPSHGGLPGASSEKGR-KTYPTVKICNYEGPAKIEVDL 95
Query: 735 XQHK-TPEEHPHKL 773
H P H H L
Sbjct: 96 VTHSDPPRAHAHSL 109
>BT009769-1|AAP88771.1| 899|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 899
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L I+EQP Q FRFRY E +HG L G SS + K +PTV++ NY G A I+ L
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCE-GPSHGGLPGASSEKGR-KTYPTVKICNYEGPAKIEVDL 95
Query: 735 XQHK-TPEEHPHKL 773
H P H H L
Sbjct: 96 VTHSDPPRAHAHSL 109
>BC002844-1|AAH02844.1| 899|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 899
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L I+EQP Q FRFRY E +HG L G SS + K +PTV++ NY G A I+ L
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCE-GPSHGGLPGASSEKGR-KTYPTVKICNYEGPAKIEVDL 95
Query: 735 XQHK-TPEEHPHKL 773
H P H H L
Sbjct: 96 VTHSDPPRAHAHSL 109
>AY865619-1|AAW56071.1| 900|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 900
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L I+EQP Q FRFRY E +HG L G SS + K +PTV++ NY G A I+ L
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCE-GPSHGGLPGASSEKGR-KTYPTVKICNYEGPAKIEVDL 95
Query: 735 XQHK-TPEEHPHKL 773
H P H H L
Sbjct: 96 VTHSDPPRAHAHSL 109
>AL121928-1|CAC08399.1| 900|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 900
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L I+EQP Q FRFRY E +HG L G SS + K +PTV++ NY G A I+ L
Sbjct: 38 PYLVIVEQPKQRGFRFRYGCE-GPSHGGLPGASSEKGR-KTYPTVKICNYEGPAKIEVDL 95
Query: 735 XQHK-TPEEHPHKL 773
H P H H L
Sbjct: 96 VTHSDPPRAHAHSL 109
>Z47748-1|CAB94757.1| 969|Homo sapiens NFKB1 protein.
Length = 969
Score = 53.6 bits (123), Expect = 9e-07
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L+I+EQP Q FRFRY E +HG L G SS NK K +P V++ NY G A + QL
Sbjct: 42 PYLQILEQPKQRGFRFRYVCE-GPSHGGLPGASSEKNK-KSYPQVKICNYVGPAKVIVQL 99
Query: 735 XQH-KTPEEHPHKL 773
+ K H H L
Sbjct: 100 VTNGKNIHLHAHSL 113
>Z22948-1|CAA80524.2| 550|Homo sapiens p65 subunit of transcription
factor NF-kappaB protein.
Length = 550
Score = 53.6 bits (123), Expect = 9e-07
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +3
Query: 510 DLNNLIYLDNGSKRNRPFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPT 686
+L LI+ ++ + P++ IIEQP Q RFRY E + G + G+ S T+ K HPT
Sbjct: 3 ELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCE-GRSAGSIPGRRS-TDTTKTHPT 60
Query: 687 VELVNYTGQAVIKCQLXQHKTPEE-HPHKL 773
+++ YTG ++ L P HPH+L
Sbjct: 61 IKINGYTGPGTVRISLVTKDPPHRPHPHEL 90
>M58603-1|AAA36360.1| 968|Homo sapiens nuclear factor kappa-B DNA
binding subunit protein.
Length = 968
Score = 53.6 bits (123), Expect = 9e-07
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L+I+EQP Q FRFRY E +HG L G SS NK K +P V++ NY G A + QL
Sbjct: 42 PYLQILEQPKQRGFRFRYVCE-GPSHGGLPGASSEKNK-KSYPQVKICNYVGPAKVIVQL 99
Query: 735 XQH-KTPEEHPHKL 773
+ K H H L
Sbjct: 100 VTNGKNIHLHAHSL 113
>M55643-1|AAA36361.1| 969|Homo sapiens factor KBF1 protein.
Length = 969
Score = 53.6 bits (123), Expect = 9e-07
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L+I+EQP Q FRFRY E +HG L G SS NK K +P V++ NY G A + QL
Sbjct: 43 PYLQILEQPKQRGFRFRYVCE-GPSHGGLPGASSEKNK-KSYPQVKICNYVGPAKVIVQL 100
Query: 735 XQH-KTPEEHPHKL 773
+ K H H L
Sbjct: 101 VTNGKNIHLHAHSL 114
>BC051765-1|AAH51765.1| 969|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 1 (p105)
protein.
Length = 969
Score = 53.6 bits (123), Expect = 9e-07
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L+I+EQP Q FRFRY E +HG L G SS NK K +P V++ NY G A + QL
Sbjct: 43 PYLQILEQPKQRGFRFRYVCE-GPSHGGLPGASSEKNK-KSYPQVKICNYVGPAKVIVQL 100
Query: 735 XQH-KTPEEHPHKL 773
+ K H H L
Sbjct: 101 VTNGKNIHLHAHSL 114
>AY223820-1|AAO30127.1| 968|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 1 (p105)
protein.
Length = 968
Score = 53.6 bits (123), Expect = 9e-07
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L+I+EQP Q FRFRY E +HG L G SS NK K +P V++ NY G A + QL
Sbjct: 42 PYLQILEQPKQRGFRFRYVCE-GPSHGGLPGASSEKNK-KSYPQVKICNYVGPAKVIVQL 99
Query: 735 XQH-KTPEEHPHKL 773
+ K H H L
Sbjct: 100 VTNGKNIHLHAHSL 113
>AF213884-1|AAF35232.1| 968|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 1 protein.
Length = 968
Score = 53.6 bits (123), Expect = 9e-07
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P+L+I+EQP Q FRFRY E +HG L G SS NK K +P V++ NY G A + QL
Sbjct: 42 PYLQILEQPKQRGFRFRYVCE-GPSHGGLPGASSEKNK-KSYPQVKICNYVGPAKVIVQL 99
Query: 735 XQH-KTPEEHPHKL 773
+ K H H L
Sbjct: 100 VTNGKNIHLHAHSL 113
>M62399-1|AAA36408.1| 551|Homo sapiens NF-kappa-B transcription
factor protein.
Length = 551
Score = 53.2 bits (122), Expect = 1e-06
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +3
Query: 510 DLNNLIYLDNGSKRNRPFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPT 686
+L LI+ ++ + P++ IIEQP Q RFRY E + G + G+ S T+ K HPT
Sbjct: 3 ELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCE-GRSAGSIPGERS-TDTTKTHPT 60
Query: 687 VELVNYTGQAVIKCQLXQHKTPEE-HPHKL 773
+++ YTG ++ L P HPH+L
Sbjct: 61 IKINGYTGPGTVRISLVTKDPPHRPHPHEL 90
>BC110830-1|AAI10831.1| 377|Homo sapiens RELA protein protein.
Length = 377
Score = 53.2 bits (122), Expect = 1e-06
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +3
Query: 510 DLNNLIYLDNGSKRNRPFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPT 686
+L LI+ ++ + P++ IIEQP Q RFRY E + G + G+ S T+ K HPT
Sbjct: 3 ELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCE-GRSAGSIPGERS-TDTTKTHPT 60
Query: 687 VELVNYTGQAVIKCQLXQHKTPEE-HPHKL 773
+++ YTG ++ L P HPH+L
Sbjct: 61 IKINGYTGPGTVRISLVTKDPPHRPHPHEL 90
>BC033522-1|AAH33522.1| 548|Homo sapiens RELA protein protein.
Length = 548
Score = 53.2 bits (122), Expect = 1e-06
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +3
Query: 510 DLNNLIYLDNGSKRNRPFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPT 686
+L LI+ ++ + P++ IIEQP Q RFRY E + G + G+ S T+ K HPT
Sbjct: 3 ELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCE-GRSAGSIPGERS-TDTTKTHPT 60
Query: 687 VELVNYTGQAVIKCQLXQHKTPEE-HPHKL 773
+++ YTG ++ L P HPH+L
Sbjct: 61 IKINGYTGPGTVRISLVTKDPPHRPHPHEL 90
>BC014095-1|AAH14095.1| 246|Homo sapiens RELA protein protein.
Length = 246
Score = 53.2 bits (122), Expect = 1e-06
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +3
Query: 510 DLNNLIYLDNGSKRNRPFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPT 686
+L LI+ ++ + P++ IIEQP Q RFRY E + G + G+ S T+ K HPT
Sbjct: 3 ELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCE-GRSAGSIPGERS-TDTTKTHPT 60
Query: 687 VELVNYTGQAVIKCQLXQHKTPEE-HPHKL 773
+++ YTG ++ L P HPH+L
Sbjct: 61 IKINGYTGPGTVRISLVTKDPPHRPHPHEL 90
>BC011603-1|AAH11603.1| 220|Homo sapiens RELA protein protein.
Length = 220
Score = 53.2 bits (122), Expect = 1e-06
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +3
Query: 510 DLNNLIYLDNGSKRNRPFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPT 686
+L LI+ ++ + P++ IIEQP Q RFRY E + G + G+ S T+ K HPT
Sbjct: 3 ELFPLIFPAEPAQASGPYVEIIEQPKQRGMRFRYKCE-GRSAGSIPGERS-TDTTKTHPT 60
Query: 687 VELVNYTGQAVIKCQLXQHKTPEE-HPHKL 773
+++ YTG ++ L P HPH+L
Sbjct: 61 IKINGYTGPGTVRISLVTKDPPHRPHPHEL 90
>L19067-1|AAA20946.1| 537|Homo sapiens NF-kappa-B transcription
factor subunit protein.
Length = 537
Score = 44.4 bits (100), Expect = 6e-04
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 558 PFLRIIEQP-QDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQL 734
P + EQP Q RFRY E + G + G+ S T+ K HPT+++ YTG ++ L
Sbjct: 6 PLIFPAEQPKQRGMRFRYKCE-GRSAGSIPGERS-TDTTKTHPTIKINGYTGPGTVRISL 63
Query: 735 XQHKTPEE-HPHKL 773
P HPH+L
Sbjct: 64 VTKDPPHRPHPHEL 77
>AY455868-1|AAR13863.1| 534|Homo sapiens v-rel
reticuloendotheliosis viral oncogene homolog A, nuclear
factor of kappa l protein.
Length = 534
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 558 PFLRIIEQPQDYFRFRYASEMAGTHGCLLGKSSSTNKNKVHPTVELVNYTGQAVIKCQLX 737
P + E Q RFRY E + G + G+ S T+ K HPT+++ YTG ++ L
Sbjct: 3 PLIFPAEPKQRGMRFRYKCE-GRSAGSIPGERS-TDTTKTHPTIKINGYTGPGTVRISLV 60
Query: 738 QHKTPEE-HPHKL 773
P HPH+L
Sbjct: 61 TKDPPHRPHPHEL 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,008,035
Number of Sequences: 237096
Number of extensions: 2200565
Number of successful extensions: 3533
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3527
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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