Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_C11
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74041-7|CAA98518.2|  335|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z83218-1|CAB05686.1|  282|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass...    30   2.0  
AF016687-8|AAK72065.1|  737|Caenorhabditis elegans Hypothetical ...    30   2.6  
AF016687-7|AAK72063.1|  881|Caenorhabditis elegans Hypothetical ...    30   2.6  
Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z83218-6|CAI58632.1|  273|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z74041-7|CAA98518.2|  335|Caenorhabditis elegans Hypothetical
           protein T03F7.4 protein.
          Length = 335

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
 Frame = -3

Query: 431 ILITGSCRHFYSIPFALT---FNTTIQFFLQT*FMLYYISSLRTQYEFSNENKQ*K-KHF 264
           I++T   +   ++ FAL    F+ TI F L + F   Y+    T    S   K+ K K+F
Sbjct: 189 IIVTTEAKTIGAVLFALLIFIFSQTIFFILHSSF---YLCKSTTSLAVSERTKKLKRKYF 245

Query: 263 FRVCLFYIICIQVISMGKKYMLI 195
             VC+  II I +++    Y ++
Sbjct: 246 LSVCIQVIIPIVIMAFPVSYFVL 268


>Z83218-1|CAB05686.1|  282|Caenorhabditis elegans Hypothetical
           protein C31A11.4 protein.
          Length = 282

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -1

Query: 364 YNFFCKLNLCFTIYLLYEHNMNFQMKINNKKNTFF-GYVYFTLFVFKSF 221
           YNF C +N C+  Y L  H   F        N FF   V F LF++  F
Sbjct: 157 YNFLCTMNQCYATYWL-SHERIFSF-----SNVFFSAVVSFRLFIWNHF 199


>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 177 protein.
          Length = 1667

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1

Query: 526 YI*TMAQRETDRFFA*LNSHRTTLDFAMLVKWLEHMDVCSES 651
           Y  T+  R  + FFA + +H T  +   ++++LE+ ++ S+S
Sbjct: 23  YFSTIRSRHAEHFFADMQNHNTQNEKKGIIRYLEYYEINSQS 64


>AF016687-8|AAK72065.1|  737|Caenorhabditis elegans Hypothetical
           protein T21D12.9c protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 564 ETVCFSLSHCL-DILGCSNLESTEVLVERVNN 472
           +TVC  L HC+ +++ CS+L+ +E+     NN
Sbjct: 22  DTVCIGLCHCVGNVVDCSSLDLSEIPTTIPNN 53


>AF016687-7|AAK72063.1|  881|Caenorhabditis elegans Hypothetical
           protein T21D12.9a protein.
          Length = 881

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 564 ETVCFSLSHCL-DILGCSNLESTEVLVERVNN 472
           +TVC  L HC+ +++ CS+L+ +E+     NN
Sbjct: 22  DTVCIGLCHCVGNVVDCSSLDLSEIPTTIPNN 53


>Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical
           protein F49H6.11 protein.
          Length = 327

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -1

Query: 415 VVDIFTLFLLHSLSIPQYNFFCKL-NLCFTIYLLYEHNMNFQMKINNKKNTFFGYVYFTL 239
           +V +FTLFL++ L I Q  F   L +L    YL Y+   +F    N        +  F  
Sbjct: 100 IVAVFTLFLIYILHILQQTFHLLLFSLAIMSYLKYQFPYDFLYSQNYISKYVRNFNVF-- 157

Query: 238 FVFKSF 221
           FV K F
Sbjct: 158 FVLKDF 163


>Z83218-6|CAI58632.1|  273|Caenorhabditis elegans Hypothetical
           protein C31A11.10 protein.
          Length = 273

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -1

Query: 361 NFFCKLNLCFTIY-LLYEHNMNFQMKINNKKNTFF-GYVYFTLFVFKSF 221
           +F C +N C+T Y LL+E       +I    N FF   V F LF++  F
Sbjct: 158 SFLCAMNQCYTTYWLLHE-------RITTFSNVFFSAVVTFRLFIWNHF 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,300,018
Number of Sequences: 27780
Number of extensions: 368865
Number of successful extensions: 914
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)