Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_C08
         (825 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004506-1|AAO42670.1| 1545|Drosophila melanogaster AT10293p pro...    66   7e-11
AF495912-1|AAN60444.1| 2576|Drosophila melanogaster nesprin prot...    66   7e-11
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    66   7e-11

>BT004506-1|AAO42670.1| 1545|Drosophila melanogaster AT10293p protein.
          Length = 1545

 Score = 65.7 bits (153), Expect = 7e-11
 Identities = 39/90 (43%), Positives = 51/90 (56%)
 Frame = +1

Query: 25   RESLRFAKHLSELLLTECDATEDEAMMKEVESLSLRYEDLLTQAKKRELQINNLRLPHSA 204
            + S    KHLS LLLTEC A +  A +  V  L+LR++ L +Q K R+    N      A
Sbjct: 1136 QSSTELVKHLSHLLLTECKADDQAAEVDTVAELTLRFDTLQSQWKARQQHDQN------A 1189

Query: 205  SYALTCEHESGRLTXPLCSEXNWKQLDNDL 294
            S       E GRLT PLC++ NW+Q+DNDL
Sbjct: 1190 S-------EVGRLTCPLCTQRNWQQIDNDL 1212


>AF495912-1|AAN60444.1| 2576|Drosophila melanogaster nesprin protein.
          Length = 2576

 Score = 65.7 bits (153), Expect = 7e-11
 Identities = 39/90 (43%), Positives = 51/90 (56%)
 Frame = +1

Query: 25   RESLRFAKHLSELLLTECDATEDEAMMKEVESLSLRYEDLLTQAKKRELQINNLRLPHSA 204
            + S    KHLS LLLTEC A +  A +  V  L+LR++ L +Q K R+    N      A
Sbjct: 2163 QSSTELVKHLSHLLLTECKADDQAAEVDTVAELTLRFDTLQSQWKARQQHDQN------A 2216

Query: 205  SYALTCEHESGRLTXPLCSEXNWKQLDNDL 294
            S       E GRLT PLC++ NW+Q+DNDL
Sbjct: 2217 S-------EVGRLTCPLCTQRNWQQIDNDL 2239


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
             isoform D protein.
          Length = 11707

 Score = 65.7 bits (153), Expect = 7e-11
 Identities = 39/90 (43%), Positives = 51/90 (56%)
 Frame = +1

Query: 25    RESLRFAKHLSELLLTECDATEDEAMMKEVESLSLRYEDLLTQAKKRELQINNLRLPHSA 204
             + S    KHLS LLLTEC A +  A +  V  L+LR++ L +Q K R+    N      A
Sbjct: 11294 QSSTELVKHLSHLLLTECKADDQAAEVDTVAELTLRFDTLQSQWKARQQHDQN------A 11347

Query: 205   SYALTCEHESGRLTXPLCSEXNWKQLDNDL 294
             S       E GRLT PLC++ NW+Q+DNDL
Sbjct: 11348 S-------EVGRLTCPLCTQRNWQQIDNDL 11370


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,148,708
Number of Sequences: 53049
Number of extensions: 358800
Number of successful extensions: 1063
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)