Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_C08
         (825 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032655-1|CAA21726.1|  995|Caenorhabditis elegans Hypothetical ...    31   1.0  
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    28   9.3  

>AL032655-1|CAA21726.1|  995|Caenorhabditis elegans Hypothetical
           protein Y6B3B.3 protein.
          Length = 995

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 28  ESLRFAKHLSELLLTECDATEDEAMMKEVESLSLRYEDLLTQAKKRELQINNLRLP 195
           +S  F   +  ++ T  DAT +  M K  + ++   EDL TQ K+ +L +  L+ P
Sbjct: 238 KSEEFKSSMRSIIETSIDATLNNRMKKLEDKIAELTEDLKTQKKRLDLALVELKNP 293


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = +1

Query: 43  AKHLSELLLTECDATEDEAMMKEVES-LSLRYEDLLTQAKKRELQINNLRLPHSASYA 213
           AKH ++  L + +  ED + ++E  S L+ + +DL +   + +LQ++ LR   ++S A
Sbjct: 63  AKHAADKALNK-EGGEDVSKLREEHSALAKKVDDLASLVAELQLQLSTLRQGQTSSVA 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,760,866
Number of Sequences: 27780
Number of extensions: 168098
Number of successful extensions: 525
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)