Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_C03
         (906 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    47   2e-05

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +3

Query: 165 DEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNP 281
           DE+ SD++ MKLVD+++YE  G+ V R +G+I + G NP
Sbjct: 11  DELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNP 49



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +3

Query: 513 RFKELQFFTGESMDC---DGMVXMMEYXDFDGTQIPIMMFFKHGLEE 644
           RFK L FF GE       +G V ++EY D DGT++P +M  K  + E
Sbjct: 132 RFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIE 178



 Score = 33.9 bits (74), Expect = 0.16
 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +1

Query: 283 SAEEA--DEGTDSAV*SGVDIXLNHGLVEXYAY 375
           SAEE   D+G+D  V  G+DI LNH LVE   Y
Sbjct: 50  SAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCY 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,802,910
Number of Sequences: 27780
Number of extensions: 228976
Number of successful extensions: 394
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)