Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_C02
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    32   0.62 
AF047663-7|AAC04448.1|  178|Caenorhabditis elegans Hypothetical ...    30   2.5  
U23452-1|AAK31545.2|  284|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical p...    29   5.8  
Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z50857-5|CAJ43436.1|  719|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z50857-4|CAC42283.1|  694|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AF136239-1|AAD34463.1|  694|Caenorhabditis elegans DAF-12 A2 pro...    28   7.7  
AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1 pro...    28   7.7  

>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
            F45E4.4 protein.
          Length = 2361

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -3

Query: 433  WNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRAS 329
            W K T   TPS S KP +  P R  P P   S+ S
Sbjct: 1980 WAKTTTSQTPSTSTKPTVTAPKRSDPIPIAPSQRS 2014


>AF047663-7|AAC04448.1|  178|Caenorhabditis elegans Hypothetical
           protein W09G12.6 protein.
          Length = 178

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
 Frame = -2

Query: 389 AGNAGPGQA-QPVPVYVVQSEPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGS 213
           A +AG  QA  P     + S   G SA   A    GG  GA+   ++ G   L    GG 
Sbjct: 58  AASAGSSQAASPAGASAIGSSQAGSSAGSPAAAAAGGSGGADAGAILNGVGGLMRSVGGL 117

Query: 212 VRVHCEAAG 186
                 AAG
Sbjct: 118 AGAAGGAAG 126


>U23452-1|AAK31545.2|  284|Caenorhabditis elegans Hypothetical
           protein R07G3.5 protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 621 KLNLFRSPSSSLDFNAGFKKFDTPFYRSSWEPMWD 725
           K + F   +S+   N G K FD  F R  W+  WD
Sbjct: 27  KRSAFFRTASAFTQNHGHKTFDEHFPRGEWDKNWD 61


>Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical
           protein Y49E10.29 protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -3

Query: 394 PKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTFRAAPEV 215
           P P    PV+ +P   T S A PA+ A  + +   SA P + S  +  P   T +A+ + 
Sbjct: 402 PAPQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAPVQAPNTPTQKASSQD 461

Query: 214 P 212
           P
Sbjct: 462 P 462


>Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical protein
            W10C6.1 protein.
          Length = 1461

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 595  LMTSECAALNDAPTFCLNM*STPPPSVLKLGALGMALGEFLIANALAL 452
            +MTS   A +   +  +N+  +  P+ + LG + M +    IANALAL
Sbjct: 936  MMTSSQVANHVKESEYINIHQSAEPAAIALGMMFMKMNNEFIANALAL 983


>Z50857-5|CAJ43436.1|  719|Caenorhabditis elegans Hypothetical
           protein F11A1.3d protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +3

Query: 249 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 425
           G D N+++       FN+R K+ +    L+ +        + G ++PG   +     K  
Sbjct: 277 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 336

Query: 426 LFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 536
            ++ N H + A+     ++P +  +    N+   G +
Sbjct: 337 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 373


>Z50857-4|CAC42283.1|  694|Caenorhabditis elegans Hypothetical
           protein F11A1.3b protein.
          Length = 694

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +3

Query: 249 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 425
           G D N+++       FN+R K+ +    L+ +        + G ++PG   +     K  
Sbjct: 252 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 311

Query: 426 LFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 536
            ++ N H + A+     ++P +  +    N+   G +
Sbjct: 312 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 348


>Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical
           protein F11A1.3a protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +3

Query: 249 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 425
           G D N+++       FN+R K+ +    L+ +        + G ++PG   +     K  
Sbjct: 311 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 370

Query: 426 LFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 536
            ++ N H + A+     ++P +  +    N+   G +
Sbjct: 371 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 407


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
            F35A5.1 protein.
          Length = 1274

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -3

Query: 454  LRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAA 314
            ++ W   W     PA P  +P+P  + PV     P      SP +AA
Sbjct: 983  VKKWKPPWEDDDEPAEPVSAPEPEKKTPVLAKKAPAKPRDPSPKKAA 1029


>AF136239-1|AAD34463.1|  694|Caenorhabditis elegans DAF-12 A2
           protein.
          Length = 694

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +3

Query: 249 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 425
           G D N+++       FN+R K+ +    L+ +        + G ++PG   +     K  
Sbjct: 252 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 311

Query: 426 LFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 536
            ++ N H + A+     ++P +  +    N+   G +
Sbjct: 312 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 348


>AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1
           protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +3

Query: 249 GNDKNVLS-AIGSADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVN 425
           G D N+++       FN+R K+ +    L+ +        + G ++PG   +     K  
Sbjct: 311 GYDPNIMAHRAPPPSFNNRPKMDSGQVVLSTEEYKQLLSRIPGAQVPGLMNEEEPINKRA 370

Query: 426 LFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVD 536
            ++ N H + A+     ++P +  +    N+   G +
Sbjct: 371 AYNCNGHPMPAETTPPYSAPMSDMSLSRHNSTSSGTE 407


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,099,374
Number of Sequences: 27780
Number of extensions: 349278
Number of successful extensions: 1018
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)