Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_B22
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     31   1.2  
03_04_0061 - 16949038-16950006                                         29   3.8  
03_02_0254 + 6862762-6863663,6863994-6864241,6864323-6864465,686...    28   8.7  

>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 710 SRGKRLVSL*SCRVSPPLTXASIFVMLVQGGGAYGKTPAT 591
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 677 RTIKIPGVSPWKLPRALSCSXPAXYRIPVRLSPFGKRGAS 796
           RT+K PG+   ++PRA+  + P  Y   VR +   +R AS
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSAS 294


>03_02_0254 +
           6862762-6863663,6863994-6864241,6864323-6864465,
           6864532-6864570,6865403-6865501
          Length = 476

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -2

Query: 845 WXDDXXRSEIPTA*AMRKRHASRREKGGQVSGXRQXRNRRAHE 717
           W DD      P     RKR   R E G +V G  + R + A E
Sbjct: 107 WIDDRGACFFPAPEGGRKRKRERDEAGSEVKGEDRRRRQPAAE 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,205,462
Number of Sequences: 37544
Number of extensions: 357973
Number of successful extensions: 884
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)