Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_B18
         (1217 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    29   5.6  
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813...    29   9.8  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   9.8  
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    29   9.8  
03_05_0161 + 21400580-21401695                                         29   9.8  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    29   9.8  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   9.8  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    29   9.8  

>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
            257038-257169,257297-258589,259133-259837,260465-260549,
            260604-260650,260810-260900,261838-262101,262195-262309,
            262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 1074 GXPPPXXXXXKXKXXPPPPPP 1136
            G PPP     K    PPPPPP
Sbjct: 927  GAPPPPPPPGKPGGPPPPPPP 947


>10_08_0936 - 21679002-21679800,21679893-21680116,21681174-21681361,
            21681505-21682597
          Length = 767

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 1080 PPPXXXXXKXKXXPPPPPP 1136
            PPP     K +  PPPPPP
Sbjct: 98   PPPTPLLPKHQQAPPPPPP 116


>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 1080 PPPXXXXXKXKXXPPPPPPXXKK 1148
            PPP     K    PPPPPP   K
Sbjct: 751  PPPPLMTGKKAPAPPPPPPQAPK 773


>09_04_0081 - 14400293-14400397,14400953-14401036,14401144-14401214,
            14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 1068 GXGXPPPXXXXXKXKXXPPPPPP 1136
            G G  PP     K    PPPPPP
Sbjct: 135  GPGQEPPPPHVPKAAPPPPPPPP 157


>03_05_0161 + 21400580-21401695
          Length = 371

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 1062 GGGXGXPPPXXXXXKXKXXPPPPPP 1136
            GGG   PPP     + +  P PPPP
Sbjct: 18   GGGTTTPPPPPPAQQQQQQPLPPPP 42


>03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,
            8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 1065 GGXGXPPPXXXXXKXKXXPPPPPP 1136
            GG   PPP          PPPPPP
Sbjct: 262  GGPPRPPPPQVPPPPPQAPPPPPP 285


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 1074 GXPPPXXXXXKXKXXPPPPPPXXKK 1148
            G PPP     K    PPPPPP  KK
Sbjct: 352  GPPPPPPP--KGPSPPPPPPPGGKK 374


>02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,
            3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 1080 PPPXXXXXKXKXXPPPPPPXXKK 1148
            PPP          PPPPPP  KK
Sbjct: 360  PPPPPPPPPPPPRPPPPPPPIKK 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,570,378
Number of Sequences: 37544
Number of extensions: 309677
Number of successful extensions: 4011
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3295
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3736328292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)