Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_B13
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161     91   1e-18
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764...    80   2e-15
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129           78   8e-15
07_01_1001 - 8460467-8460799                                           65   8e-11
07_03_0321 + 16757414-16757743                                         63   3e-10
01_06_0098 - 26416768-26416998                                         32   0.72 
12_01_0090 + 717524-719080                                             29   6.7  
06_03_0854 + 25400855-25403741,25406174-25407708                       29   6.7  

>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
          Length = 113

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 40/70 (57%), Positives = 58/70 (82%)
 Frame = +1

Query: 130 MRYVAAYLLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 309
           M+ +AAYLLAVLGG  +P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGRE
Sbjct: 1   MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60

Query: 310 KLSSMPVGGG 339
           K +S+P GGG
Sbjct: 61  KFASVPSGGG 70


>02_04_0074 -
           19474786-19474812,19475174-19475400,19476362-19476496,
           19478662-19479193
          Length = 306

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 34/71 (47%), Positives = 53/71 (74%)
 Frame = +1

Query: 127 KMRYVAAYLLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR 306
           +M++++AYLLA L G   P+A D+  IL SVG E D  K++ ++++L GKD+ ++IA+GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252

Query: 307 EKLSSMPVGGG 339
           EK +S+P GGG
Sbjct: 253 EKFASVPCGGG 263


>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
          Length = 114

 Score = 78.2 bits (184), Expect = 8e-15
 Identities = 33/70 (47%), Positives = 52/70 (74%)
 Frame = +1

Query: 130 MRYVAAYLLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 309
           M++++AYL+A L G  +P A D+  IL SVG E D  K++ ++++++GKD+ +LIA GRE
Sbjct: 1   MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60

Query: 310 KLSSMPVGGG 339
           K +S+P GGG
Sbjct: 61  KFASVPSGGG 70


>07_01_1001 - 8460467-8460799
          Length = 110

 Score = 64.9 bits (151), Expect = 8e-11
 Identities = 30/68 (44%), Positives = 45/68 (66%)
 Frame = +1

Query: 130 MRYVAAYLLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 309
           MR+VAAYL+A +GG  +P   DV  IL +VG + D +KL  +  ++ GKD+ +++AAG E
Sbjct: 1   MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSE 60

Query: 310 KLSSMPVG 333
            L+   VG
Sbjct: 61  MLAFGGVG 68


>07_03_0321 + 16757414-16757743
          Length = 109

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = +1

Query: 130 MRYVAAYLLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 309
           MR+VAAYL+A +GG  +P   DV  IL +VG + D +KL  +  ++ GKD+ +++AAG E
Sbjct: 1   MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 60

Query: 310 KLS 318
            L+
Sbjct: 61  MLA 63


>01_06_0098 - 26416768-26416998
          Length = 76

 Score = 31.9 bits (69), Expect = 0.72
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 181 PAAADVEKILSSVGIEADAEKLKKVITELNGKD 279
           P    V KI+ +V IEAD+ + K ++  L GKD
Sbjct: 16  PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48


>12_01_0090 + 717524-719080
          Length = 518

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 335 PPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIF 201
           PP  +  S   P  ++ S+S   SS +   + ++S S+PT L  F
Sbjct: 60  PPAVLSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTF 104


>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 23/79 (29%), Positives = 34/79 (43%)
 Frame = -1

Query: 338  PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVXLPPST 159
            PPP  I  +    A +S     P+S+V + L+ SASA+       F+ +  A   +PP  
Sbjct: 1120 PPPAPIPAATPAKALVSAPAPAPISTVSSTLAASASAA-----AAFAPAPVAAEAIPPPP 1174

Query: 158  ASKYAAT*RIF*XLIDTKR 102
                AA   +     D KR
Sbjct: 1175 PPLPAAATAVAAPAPDRKR 1193


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,839,572
Number of Sequences: 37544
Number of extensions: 216616
Number of successful extensions: 463
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)