Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_B13
         (902 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    77   2e-14
U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    74   1e-13
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    31   0.85 
U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 47/112 (41%), Positives = 56/112 (50%)
 Frame = +1

Query: 130 MRYVAAYLLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 309
           MRYV+AYLLAVLGG   P   D++ ILS+VG++ADAE  K V++ L GK VE+LIA G  
Sbjct: 1   MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60

Query: 310 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 465
            L S  V GG                                   MGFGLFD
Sbjct: 61  GLVS--VSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110


>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 33/69 (47%), Positives = 47/69 (68%)
 Frame = +1

Query: 130 MRYVAAYLLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 309
           M+Y+ AYLLA LGG  +P+A DV K+L + G++ D E    V+  L GK + ++IA G+ 
Sbjct: 1   MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60

Query: 310 KLSSMPVGG 336
           KLSS+P GG
Sbjct: 61  KLSSVPSGG 69


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 178 TPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 294
           TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 445 TPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 178 TPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 294
           TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 445 TPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical
           protein T19A5.5 protein.
          Length = 511

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = +2

Query: 47  SCLLV*RLFKPHVILSALHVSCQLGLKKCVTWPRIYWLC 163
           SC      F+   +    H  CQ G  +CV  PR  W C
Sbjct: 37  SCRACAAFFRRVFVTHKQHFKCQTGQNQCVPDPRGRWNC 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,645,443
Number of Sequences: 27780
Number of extensions: 181299
Number of successful extensions: 372
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)