Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_B12
         (834 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   3.5  
07_01_0080 + 587674-588510                                             26   5.6  
09_02_0603 - 11150739-11150746,11150791-11151340                       28   8.0  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    28   8.0  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +2

Query: 623  GXGXPXXLPXKXXKKKXXXPPXXGGXXFPPPPPP 724
            G G P   P     +    PP   G   PPPPPP
Sbjct: 1156 GLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPP 1189


>07_01_0080 + 587674-588510
          Length = 278

 Score = 25.8 bits (54), Expect(2) = 5.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 680 PPXXGGXXFPPPPPP 724
           PP  G    PPPPPP
Sbjct: 98  PPSSGSPPPPPPPPP 112



 Score = 21.4 bits (43), Expect(2) = 5.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 707 PPPPPPXXXXXFF 745
           PPPPPP      F
Sbjct: 111 PPPPPPPPPPPLF 123


>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +2

Query: 635 PXXLPXKXXKKKXXXPPXXGGXXFPPPPPP 724
           P   P +  K     PP  G   FPPPPPP
Sbjct: 23  PASRPPRLEKGNFALPPPFG---FPPPPPP 49


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 680 PPXXGGXXFPPPPPP 724
           PP  GG   PPPPPP
Sbjct: 297 PPPVGGTQPPPPPPP 311


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,912,480
Number of Sequences: 37544
Number of extensions: 283479
Number of successful extensions: 4934
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4007
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)