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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_B07
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803...   356   1e-98
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...   356   2e-98
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065...   355   2e-98
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629...   351   6e-97
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448...   338   3e-93
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760...   317   7e-87
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007...   206   2e-53
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593...   198   5e-51
03_05_0469 + 24640925-24641081,24641292-24641644,24641870-246420...    31   1.2  
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708...    30   2.1  
07_03_0941 - 22763733-22763970,22764077-22764213,22764282-227644...    29   3.7  
12_02_0046 + 12830974-12832386                                         29   6.5  
06_03_0384 + 20174441-20175788,20176215-20176858                       29   6.5  
09_04_0292 - 16436918-16439233                                         28   8.6  
07_03_0840 + 21935504-21936424,21936516-21938177                       28   8.6  
07_03_0839 + 21916842-21917852,21917944-21919602                       28   8.6  
01_02_0099 + 11092529-11093140,11094153-11094424,11095378-110954...    28   8.6  

>04_04_0141 +
           23079516-23079925,23080006-23080084,23080204-23080326,
           23081655-23081771,23081886-23081945
          Length = 262

 Score =  356 bits (876), Expect = 1e-98
 Identities = 175/238 (73%), Positives = 199/238 (83%)
 Frame = +2

Query: 152 RXANVXXAKLAEQAERYDXMVEAXKHVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 331
           R  NV  AKLAEQAERY+ MVE  + VA + V   ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 9   REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 67

Query: 332 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 511
           RIISSIEQKEE++G ED++ +I+ YR ++E EL  IC  IL +L+ +L+PSS   ESKVF
Sbjct: 68  RIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVF 127

Query: 512 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELAPXHPIRLGLALNFSVF 691
           Y KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA DIA+ EL P HPIRLGLALNFSVF
Sbjct: 128 YLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVF 187

Query: 692 YYEILNSPDRACRLAKAAFDDAIAELDTLSXESYKDSTLIMQLLRDNLTLWTSDMQGD 865
           YYEILNSPDRAC LAK AFD+AI+ELDTLS ESYKDSTLIMQLLRDNLTLWTSD+  D
Sbjct: 188 YYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISED 245


>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score =  356 bits (875), Expect = 2e-98
 Identities = 175/235 (74%), Positives = 197/235 (83%)
 Frame = +2

Query: 152 RXANVXXAKLAEQAERYDXMVEAXKHVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 331
           R  NV  AKLAEQAERY+ MVE  + VA + V   ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 227 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 285

Query: 332 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 511
           RIISSIEQKEE++G ED+  +I+ YR ++E EL  IC  IL +LD +L+PSS   ESKVF
Sbjct: 286 RIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVF 345

Query: 512 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELAPXHPIRLGLALNFSVF 691
           Y KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA DIA+ EL P HPIRLGLALNFSVF
Sbjct: 346 YLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVF 405

Query: 692 YYEILNSPDRACRLAKAAFDDAIAELDTLSXESYKDSTLIMQLLRDNLTLWTSDM 856
           YYEILNSPDRAC LAK AFD+AI+ELDTLS ESYKDSTLIMQLLRDNLTLWTSD+
Sbjct: 406 YYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 460


>08_02_0753 -
           20805672-20805731,20805825-20805941,20806394-20806516,
           20806700-20806778,20806867-20807258
          Length = 256

 Score =  355 bits (874), Expect = 2e-98
 Identities = 174/239 (72%), Positives = 198/239 (82%)
 Frame = +2

Query: 152 RXANVXXAKLAEQAERYDXMVEAXKHVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 331
           R  NV  AKLAEQAERY+ MVE  + VA + V   ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 3   REENVYMAKLAEQAERYEEMVEYMEKVA-KTVDVEELTVEERNLLSVAYKNVIGARRASW 61

Query: 332 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 511
           RI+SSIEQKEE +G E+ + +I+ YR ++E EL  IC  IL +LD +L+PSS   ESKVF
Sbjct: 62  RIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVF 121

Query: 512 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELAPXHPIRLGLALNFSVF 691
           Y KMKGDYHRYLAEF TG +RKEAAE+++VAYKAA DIA+ +LAP HPIRLGLALNFSVF
Sbjct: 122 YLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVF 181

Query: 692 YYEILNSPDRACRLAKAAFDDAIAELDTLSXESYKDSTLIMQLLRDNLTLWTSDMQGDG 868
           YYEILNSPD+AC LAK AFD+AI+ELDTL  ESYKDSTLIMQLLRDNLTLWTSD+  DG
Sbjct: 182 YYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDG 240


>03_05_0881 +
           28461857-28462263,28462357-28462435,28462798-28462920,
           28463632-28463748,28463861-28463917
          Length = 260

 Score =  351 bits (862), Expect = 6e-97
 Identities = 176/246 (71%), Positives = 197/246 (80%)
 Frame = +2

Query: 131 LSSTMSERXANVXXAKLAEQAERYDXMVEAXKHVASRNVSDNELTVEERNLLSVAYKNVI 310
           +S   + R  NV  AKLAEQAERY+ MVE  + VA +     ELTVEERNLLSVAYKNVI
Sbjct: 1   MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVA-KTTDVGELTVEERNLLSVAYKNVI 59

Query: 311 GARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 490
           GARRASWRIISSIEQKEE++G E  +  I+ YRS++E EL  IC  IL +LD +L+PS+ 
Sbjct: 60  GARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSAT 119

Query: 491 TGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELAPXHPIRLGL 670
             ESKVFY KMKGDYHRYLAEF +G +RKEAAEN+LVAYK+A DIA+ +L   HPIRLGL
Sbjct: 120 AAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGL 179

Query: 671 ALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSXESYKDSTLIMQLLRDNLTLWTS 850
           ALNFSVFYYEILNSPDRAC LAK AFDDAIAELDTL  ESYKDSTLIMQLLRDNLTLWTS
Sbjct: 180 ALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 239

Query: 851 DMQGDG 868
           D   DG
Sbjct: 240 DNAEDG 245


>08_02_1026 +
           23743186-23743686,23743793-23743915,23744734-23744850,
           23744948-23745001
          Length = 264

 Score =  338 bits (831), Expect = 3e-93
 Identities = 169/241 (70%), Positives = 195/241 (80%), Gaps = 2/241 (0%)
 Frame = +2

Query: 152 RXANVXXAKLAEQAERYDXMVEAXKHVASRNVSDN--ELTVEERNLLSVAYKNVIGARRA 325
           R   V  AKLAEQAERY+ MVE  + V +   +    ELTVEERNLLSVAYKNVIGARRA
Sbjct: 10  REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69

Query: 326 SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESK 505
           SWRI+SSIEQKEE +GA       R+YR++VE EL +IC+ IL +LD+ L+P++   ++K
Sbjct: 70  SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129

Query: 506 VFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELAPXHPIRLGLALNFS 685
           VFY KMKGDYHRYLAEF TG +RK+AA+ +L AY+AA DIAM EL+P HPIRLGLALNFS
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189

Query: 686 VFYYEILNSPDRACRLAKAAFDDAIAELDTLSXESYKDSTLIMQLLRDNLTLWTSDMQGD 865
           VFYYEILNSPDRAC LAK AFD+AI+ELDTL  ESYKDSTLIMQLLRDNLTLWTSDMQ D
Sbjct: 190 VFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 249

Query: 866 G 868
           G
Sbjct: 250 G 250


>11_06_0036 +
           19474848-19475188,19475696-19475774,19475880-19476002,
           19476970-19477086,19477169-19477228
          Length = 239

 Score =  317 bits (779), Expect = 7e-87
 Identities = 152/204 (74%), Positives = 173/204 (84%)
 Frame = +2

Query: 257 ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRD 436
           ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE +G +     IR+YR ++E EL  
Sbjct: 20  ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELAR 79

Query: 437 ICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAA 616
           IC  IL +LD +L+PS+   ESKVFY KMKGDYHRYLAEF +G++RK+AAE+++ AYKAA
Sbjct: 80  ICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAA 139

Query: 617 SDIAMTELAPXHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSXESYK 796
            DIA+ +LAP HPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AI+ELD+L  ESYK
Sbjct: 140 QDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYK 199

Query: 797 DSTLIMQLLRDNLTLWTSDMQGDG 868
           DSTLIMQLLRDNLTLWTSD   DG
Sbjct: 200 DSTLIMQLLRDNLTLWTSDANDDG 223


>11_06_0360 -
           22699524-22699529,22699865-22699899,22700650-22700792,
           22701165-22701220,22701367-22701454,22702737-22703037,
           22704365-22704428
          Length = 230

 Score =  206 bits (503), Expect = 2e-53
 Identities = 114/240 (47%), Positives = 159/240 (66%)
 Frame = +2

Query: 143 MSERXANVXXAKLAEQAERYDXMVEAXKHVASRNVSDNELTVEERNLLSVAYKNVIGARR 322
           M ER   V  AKLAEQAERYD MVE  K +A  +V   +++ EER L SV +K  IGARR
Sbjct: 1   MKEREKVVRLAKLAEQAERYDDMVEFMKTLARMDV---DMSAEERLLFSVGFKKTIGARR 57

Query: 323 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGES 502
           ASWRI+ S+EQK  T G +  +  I  Y+ +VE ELR +C+++L ++  + +P + +GE+
Sbjct: 58  ASWRILESLEQKV-TAGDQPGVT-INGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGEN 115

Query: 503 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELAPXHPIRLGLALNF 682
            VF+YKMKGDY+RYLAEF+TG ++K A + SL+AY+A                   A  F
Sbjct: 116 VVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA----------------WPCAQLF 159

Query: 683 SVFYYEILNSPDRACRLAKAAFDDAIAELDTLSXESYKDSTLIMQLLRDNLTLWTSDMQG 862
           S+   EI+NSP+RA ++AK A D+A AE+++   E YKDS L+MQLL++NL LWTS++ G
Sbjct: 160 SLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSELTG 217


>01_01_0767 +
           5931031-5931281,5931414-5931594,5932020-5932129,
           5932212-5932360,5932686-5932738,5933168-5933260
          Length = 278

 Score =  198 bits (483), Expect = 5e-51
 Identities = 114/234 (48%), Positives = 143/234 (61%), Gaps = 13/234 (5%)
 Frame = +2

Query: 209 MVEAXKHVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKL 388
           MVEA   VA     D  LT EERNLLSV YKN+IGA+RA+ RII SIE KEETKG E  +
Sbjct: 1   MVEAMNSVAKL---DEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHV 57

Query: 389 NMIRAYRSQVEKELRDICSDILGVLDKY-----LIPSSQTGESKVFYYKMKGDYHRYLAE 553
                YR +VE E+  IC D++ ++DK       +   +TG  K+   ++  + +     
Sbjct: 58  RQTAEYRRKVEAEMDKICCDVINIIDKKGDYYRYLAEFKTGTEKIEVSELSLNAYEACDP 117

Query: 554 FATGNDRKEAAENSLVAYK--------AASDIAMTELAPXHPIRLGLALNFSVFYYEILN 709
           F   N    +     + +          AS  A T+L P  PIRLGLALN SVFY EI+N
Sbjct: 118 FFIFNLFLFSQVTCFIEFTIYQVLVVYTASKTAQTDLTPTDPIRLGLALNISVFYCEIMN 177

Query: 710 SPDRACRLAKAAFDDAIAELDTLSXESYKDSTLIMQLLRDNLTLWTSDMQGDGE 871
           SPD+AC+LAK AFD+A+AEL +LS E+YKDSTLIMQLLRDNL LW SDM  D +
Sbjct: 178 SPDKACQLAKNAFDEAVAELPSLSEENYKDSTLIMQLLRDNLALWNSDMADDAD 231


>03_05_0469 +
           24640925-24641081,24641292-24641644,24641870-24642043,
           24642382-24642506,24643011-24643059,24643741-24643899,
           24644037-24644219
          Length = 399

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +2

Query: 239 RNVSDN-ELTVEERNLLSVAYKNVIGA-RRASWRIISSIE-QKEETKGAEDKLNMIRAYR 409
           R +SD  E  +E+ N  + AY+  +    + ++ I+S  + QKE  K  E++   ++A  
Sbjct: 181 RLLSDKMEKEIEDVNTDNKAYEACLQRLEQETYNILSETDFQKERQKVIEEEEKKLKAAI 240

Query: 410 SQVEKELRDICSDI 451
            + EK+  +ICS++
Sbjct: 241 EEAEKQYSEICSEM 254


>07_03_1647 +
           28370226-28370369,28370452-28370611,28370704-28370831,
           28372512-28372628,28372729-28372782,28372985-28373075,
           28373517-28373688,28374452-28374573,28374726-28374817,
           28375331-28375373,28375596-28375656,28376367-28376515,
           28376659-28376729,28376805-28376975,28377056-28377124,
           28377427-28377528,28377629-28377697,28378060-28378138,
           28378238-28378337,28378438-28378513,28378715-28378894,
           28379430-28379552,28379634-28379717,28380068-28380252,
           28380339-28380477,28380585-28380644,28380926-28381030,
           28381332-28381445
          Length = 1019

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = +2

Query: 281 LLSVAYKNVIGARRASW-RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILG 457
           LLS AY N+       W + ISS+ Q+    G          Y+  + K L       L 
Sbjct: 296 LLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAGS----EIYQESLVKALTKHFGAKLL 351

Query: 458 VLDKYLIPSSQTGESKVFYYKMKGDYHRYL 547
           ++D  L+ S Q+ +SK      KGD  RY+
Sbjct: 352 IIDPSLLASGQSSKSKESESYKKGDRVRYI 381


>07_03_0941 -
           22763733-22763970,22764077-22764213,22764282-22764470,
           22765238-22765756,22766319-22767357,22767665-22767759,
           22768253-22768357
          Length = 773

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 401 AYRSQVEKELRDICSDILGVLD 466
           AY+SQ EK +R ICS++L + D
Sbjct: 28  AYQSQTEKGIRKICSELLELKD 49


>12_02_0046 + 12830974-12832386
          Length = 470

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = -3

Query: 281 GSSPPLSAHCRTRCVMLHASXPPPXRHSAQPA 186
           G S P S   R  CV   AS PPP R + QPA
Sbjct: 217 GGSVPASKATRQSCVT--ASAPPPRRVAPQPA 246


>06_03_0384 + 20174441-20175788,20176215-20176858
          Length = 663

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +2

Query: 506 VFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELAPXHPIRLGLA 673
           ++ Y  KGD HR+L E   G    E      +   A    ++++    H I LG+A
Sbjct: 456 LYEYMEKGDLHRWLHELPAGRPDMEDDTGGDIWEVAEDKRSISDWPTRHRIALGIA 511


>09_04_0292 - 16436918-16439233
          Length = 771

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 24/82 (29%), Positives = 37/82 (45%)
 Frame = +2

Query: 329 WRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKV 508
           W I +SI    E+K    + +    Y  +V   L   CS ++      LIP   T  S++
Sbjct: 548 WHIATSICCYGESKFDMAQADAELRYHYEVATVLSGYCSYLVAFAPD-LIPDG-TYTSQL 605

Query: 509 FYYKMKGDYHRYLAEFATGNDR 574
              ++  D H YLAE  T +D+
Sbjct: 606 LSCRVLKDAHAYLAECRTTSDK 627


>07_03_0840 + 21935504-21936424,21936516-21938177
          Length = 860

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 471 YLSRT--PRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEEMIRQEARRAPITFL 298
           Y+SR   P  + Q    + +  LR + +   LS+APFV +F     +   +A RAP+ F+
Sbjct: 343 YISREKRPGYNHQKKAGAMNVMLRVSAL---LSNAPFVINFDGDHYVNNSQAFRAPMCFM 399


>07_03_0839 + 21916842-21917852,21917944-21919602
          Length = 889

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 471 YLSRT--PRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEEMIRQEARRAPITFL 298
           Y+SR   P  + Q    + +  LR + +   LS+APFV +F     +   +A RAP+ F+
Sbjct: 373 YISREKRPGYNHQKKAGAMNVMLRVSAL---LSNAPFVINFDGDHYVNNSQAFRAPMCFM 429


>01_02_0099 +
           11092529-11093140,11094153-11094424,11095378-11095438,
           11095553-11095622,11095645-11095901,11096466-11096639
          Length = 481

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +1

Query: 448 HPRCPRQVPHPQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRPQGGCRELAGRV 606
           H   PR      L  + ++   L+NEGR   +P  +      + GC  + G V
Sbjct: 401 HALVPRTGDGAPLALQPLEKLRLENEGRNKVIPNLLASSMEKEDGCSRVGGAV 453


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,932,836
Number of Sequences: 37544
Number of extensions: 382658
Number of successful extensions: 1380
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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