Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_A22
         (910 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   8.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   8.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   8.9  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 860 WAVCPNPPXXPD 895
           W V P+PP  PD
Sbjct: 264 WDVLPHPPYSPD 275


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +3

Query: 669 WRNPTGL*RYQAFPPWXLPRAPSCSDPAAYRDTCP 773
           W     + R+   P       P+  +PA YR  CP
Sbjct: 253 WTKVIYVKRFFGLPVGVTAAIPTSENPADYRYFCP 287


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +3

Query: 669 WRNPTGL*RYQAFPPWXLPRAPSCSDPAAYRDTCP 773
           W     + R+   P       P+  +PA YR  CP
Sbjct: 253 WTKVIYVKRFFGLPVGVTAAIPTSENPADYRYFCP 287


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +3

Query: 669 WRNPTGL*RYQAFPPWXLPRAPSCSDPAAYRDTCP 773
           W     + R+   P       P+  +PA YR  CP
Sbjct: 253 WTKVIYVKRFFGLPVGVTAAIPTSENPADYRYFCP 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,391
Number of Sequences: 438
Number of extensions: 3566
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)