Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_A08
(918 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory elem... 35 0.36
Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory eleme... 35 0.36
Z94044-3|CAI42353.1| 1672|Homo sapiens upstream regulatory eleme... 35 0.36
DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase ... 35 0.36
AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein. 35 0.36
AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1 p... 35 0.36
AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory ele... 35 0.36
AL592046-2|CAI39579.1| 1672|Homo sapiens upstream regulatory ele... 35 0.36
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 33 1.9
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 33 1.9
AK090684-1|BAC03505.1| 294|Homo sapiens protein ( Homo sapiens ... 32 3.4
AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein. 31 4.4
AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein. 31 4.4
AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein. 31 4.4
AF174600-1|AAF04521.1| 255|Homo sapiens F-box protein Fbx20 pro... 31 4.4
>Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 35.1 bits (77), Expect = 0.36
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 716 PKGEKGGQVSG-KRQGSEQESARGSFQGETXGIF--IVLSGFATSDLSVDFCDARQGGGA 546
PK EK G G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 976 PKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGK 1035
Query: 545 YGKTPA 528
TPA
Sbjct: 1036 SKITPA 1041
>Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 35.1 bits (77), Expect = 0.36
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 716 PKGEKGGQVSG-KRQGSEQESARGSFQGETXGIF--IVLSGFATSDLSVDFCDARQGGGA 546
PK EK G G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 976 PKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGK 1035
Query: 545 YGKTPA 528
TPA
Sbjct: 1036 SKITPA 1041
>Z94044-3|CAI42353.1| 1672|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 1672
Score = 35.1 bits (77), Expect = 0.36
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 716 PKGEKGGQVSG-KRQGSEQESARGSFQGETXGIF--IVLSGFATSDLSVDFCDARQGGGA 546
PK EK G G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 976 PKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGK 1035
Query: 545 YGKTPA 528
TPA
Sbjct: 1036 SKITPA 1041
>DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase
protein.
Length = 4374
Score = 35.1 bits (77), Expect = 0.36
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 716 PKGEKGGQVSG-KRQGSEQESARGSFQGETXGIF--IVLSGFATSDLSVDFCDARQGGGA 546
PK EK G G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 976 PKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGK 1035
Query: 545 YGKTPA 528
TPA
Sbjct: 1036 SKITPA 1041
>AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.
Length = 4374
Score = 35.1 bits (77), Expect = 0.36
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 716 PKGEKGGQVSG-KRQGSEQESARGSFQGETXGIF--IVLSGFATSDLSVDFCDARQGGGA 546
PK EK G G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 976 PKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGK 1035
Query: 545 YGKTPA 528
TPA
Sbjct: 1036 SKITPA 1041
>AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1
protein.
Length = 4374
Score = 35.1 bits (77), Expect = 0.36
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 716 PKGEKGGQVSG-KRQGSEQESARGSFQGETXGIF--IVLSGFATSDLSVDFCDARQGGGA 546
PK EK G G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 976 PKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGK 1035
Query: 545 YGKTPA 528
TPA
Sbjct: 1036 SKITPA 1041
>AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 35.1 bits (77), Expect = 0.36
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 716 PKGEKGGQVSG-KRQGSEQESARGSFQGETXGIF--IVLSGFATSDLSVDFCDARQGGGA 546
PK EK G G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 976 PKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGK 1035
Query: 545 YGKTPA 528
TPA
Sbjct: 1036 SKITPA 1041
>AL592046-2|CAI39579.1| 1672|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 1672
Score = 35.1 bits (77), Expect = 0.36
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 716 PKGEKGGQVSG-KRQGSEQESARGSFQGETXGIF--IVLSGFATSDLSVDFCDARQGGGA 546
PK EK G G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 976 PKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKGK 1035
Query: 545 YGKTPA 528
TPA
Sbjct: 1036 SKITPA 1041
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -2
Query: 713 KGEKGGQ--VSGKRQGSEQESARGSFQGETXGIFIVLSGFATSDLSVDFCDARQGGGAYG 540
K GG+ + G +GS+Q S+ G++ + GFA+ + +F +A GG +
Sbjct: 566 KERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVP 625
Query: 539 KTPATRPFYGSWP 501
+P + P Y S P
Sbjct: 626 PSPYSTPSYLSVP 638
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -2
Query: 713 KGEKGGQ--VSGKRQGSEQESARGSFQGETXGIFIVLSGFATSDLSVDFCDARQGGGAYG 540
K GG+ + G +GS+Q S+ G++ + GFA+ + +F +A GG +
Sbjct: 567 KERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVP 626
Query: 539 KTPATRPFYGSWP 501
+P + P Y S P
Sbjct: 627 PSPYSTPSYLSVP 639
>AK090684-1|BAC03505.1| 294|Homo sapiens protein ( Homo sapiens
cDNA FLJ33365 fis, clone BRACE2005460, moderately
similar to Xenopus laevis mRNA for Kielin. ).
Length = 294
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = -2
Query: 758 YXTAXGYGXXRHASPKGEKGGQVSGKRQGSEQESARGSFQGETXGIFIVLSGFATSDL 585
Y G+ HA P G QV Q + S GS+QG T G+ +GFA DL
Sbjct: 131 YVELRGHTVILHAQP----GLQVLWDGQSQVEVSVPGSYQGRTCGLCGNFNGFAQDDL 184
>AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 604 PDRTIKIPXVSPWKLPRALSCSDPCRLPDTCP 699
PDR +P PW LP + C L TCP
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 241
>AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 604 PDRTIKIPXVSPWKLPRALSCSDPCRLPDTCP 699
PDR +P PW LP + C L TCP
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 241
>AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 604 PDRTIKIPXVSPWKLPRALSCSDPCRLPDTCP 699
PDR +P PW LP + C L TCP
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 241
>AF174600-1|AAF04521.1| 255|Homo sapiens F-box protein Fbx20
protein.
Length = 255
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 604 PDRTIKIPXVSPWKLPRALSCSDPCRLPDTCP 699
PDR +P PW LP + C L TCP
Sbjct: 84 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,026,070
Number of Sequences: 237096
Number of extensions: 2278271
Number of successful extensions: 11659
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11653
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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