Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_A08
         (918 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23448-8|AAL27226.1|  849|Caenorhabditis elegans Dnaj domain (pr...    30   2.0  
U23448-7|AAM81128.1|  868|Caenorhabditis elegans Dnaj domain (pr...    30   2.0  
U23448-6|AAL27225.1|  915|Caenorhabditis elegans Dnaj domain (pr...    30   2.0  
U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain (pr...    30   2.0  
Z68751-6|CAA92976.1|  202|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AF098992-14|AAD34669.1|  346|Caenorhabditis elegans Hypothetical...    29   6.2  

>U23448-8|AAL27226.1|  849|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform b
           protein.
          Length = 849

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 613 TIKIPXVSPWKLPRALSCSDPCRLPDTCPPFSPFGEAW 726
           T ++P V P   P  LS S+    P+  PP+SP  E+W
Sbjct: 43  TSQVPTVGPVMCPTELSMSNAW--PEPPPPYSPRHESW 78


>U23448-7|AAM81128.1|  868|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform d
           protein.
          Length = 868

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 613 TIKIPXVSPWKLPRALSCSDPCRLPDTCPPFSPFGEAW 726
           T ++P V P   P  LS S+    P+  PP+SP  E+W
Sbjct: 43  TSQVPTVGPVMCPTELSMSNAW--PEPPPPYSPRHESW 78


>U23448-6|AAL27225.1|  915|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform a
           protein.
          Length = 915

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 613 TIKIPXVSPWKLPRALSCSDPCRLPDTCPPFSPFGEAW 726
           T ++P V P   P  LS S+    P+  PP+SP  E+W
Sbjct: 43  TSQVPTVGPVMCPTELSMSNAW--PEPPPPYSPRHESW 78


>U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform c
           protein.
          Length = 912

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 613 TIKIPXVSPWKLPRALSCSDPCRLPDTCPPFSPFGEAW 726
           T ++P V P   P  LS S+    P+  PP+SP  E+W
Sbjct: 43  TSQVPTVGPVMCPTELSMSNAW--PEPPPPYSPRHESW 78


>Z68751-6|CAA92976.1|  202|Caenorhabditis elegans Hypothetical
           protein T05E11.8 protein.
          Length = 202

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 743 GYGXXRHASPKGEKGGQVSGKRQGSEQESARG 648
           G+G  RH   KG KGG+  GK+ G ++    G
Sbjct: 159 GFGG-RHGGRKGGKGGKHFGKKNGDKKRGPHG 189


>AF098992-14|AAD34669.1|  346|Caenorhabditis elegans Hypothetical
           protein F53C3.13a protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 141 VQTHQCILSCLDPINPXLKGDPRPXVPT 58
           V T   I+S +DP N  LK +P+  VPT
Sbjct: 302 VSTQHVIVSEVDPANQRLKTNPKDTVPT 329


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,727,251
Number of Sequences: 27780
Number of extensions: 319213
Number of successful extensions: 900
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)