Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_A03
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0725 - 20442988-20443180,20443268-20443540,20443642-204438...    31   1.6  
07_03_1175 - 24555965-24556117,24557809-24558264,24558270-245584...    31   1.6  
06_03_1506 + 30641428-30642168                                         29   5.0  
10_08_0826 - 20840445-20840504,20840692-20840778,20841344-20841706     28   8.8  
08_01_1027 - 10373760-10373837,10373918-10374201,10374286-10374394     28   8.8  
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    28   8.8  

>08_02_0725 -
           20442988-20443180,20443268-20443540,20443642-20443853,
           20443935-20444247,20444334-20444441,20444537-20444643,
           20444743-20444781
          Length = 414

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 334 TTFTKKSLVAVSQSPEDLPSPHFPVPSDKVV 242
           TTF +++  A S +PE+LP P   +  D+VV
Sbjct: 233 TTFRRRTTAAASPAPEELPLPRKILDHDRVV 263


>07_03_1175 -
           24555965-24556117,24557809-24558264,24558270-24558436,
           24558468-24558756,24559620-24559726,24559841-24559909,
           24560001-24560109
          Length = 449

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +2

Query: 293 TLGDSDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 436
           T  D   G+ G GG+    +    G  +G  YGT   G GG     GG
Sbjct: 106 TANDRAGGIRGGGGFGAGGYGSGGGYSSGGGYGTGEYGRGGGYAGNGG 153


>06_03_1506 + 30641428-30642168
          Length = 246

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +2

Query: 272 GGGKVFGTLGDSDQGLFGKG-GYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 436
           GGG  +G+ G    G +G+G GY         G   G   G+   G GG  + YGG
Sbjct: 73  GGGGGYGSGGGEGNGAYGQGYGYGSGNGGGGGGGYGGGGGGS--YGSGGMGSGYGG 126


>10_08_0826 - 20840445-20840504,20840692-20840778,20841344-20841706
          Length = 169

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -3

Query: 350 RTPCCNHLYQKVLGRCLPKSRRPSLPPFPCPK 255
           RTP       K  G C P  R+P  P  PC K
Sbjct: 46  RTPTGGESNLKAPGTCPPAPRKPRAPAAPCRK 77


>08_01_1027 - 10373760-10373837,10373918-10374201,10374286-10374394
          Length = 156

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 537 ILVRILTCQLAEWSLRSSVTEGLMSVYRPRLLTSGNCQ 650
           I+ RIL  +  EW L S V   +M    P L  SGN +
Sbjct: 82  IMERILREEAEEWELESEVRREIMEHIFPLLRRSGNAR 119


>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +2

Query: 275 GGKVFGTLGDSDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPG--GDSTSY 430
           GG+  GT G    G + +GG +   F+D RG   G  YG R  G    GD + Y
Sbjct: 244 GGRGGGTGGGGRGGGYNRGGGDDRGFDDHRGGRGG--YGGRDQGNNQRGDESGY 295


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,893,541
Number of Sequences: 37544
Number of extensions: 459105
Number of successful extensions: 1386
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)