Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_P23
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0074 - 11461300-11461681,11461744-11462009                       30   2.2  
04_03_0671 + 18549252-18549514,18550286-18550354,18550724-185508...    29   3.8  
08_01_1027 - 10373760-10373837,10373918-10374201,10374286-10374394     28   8.8  
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997...    28   8.8  

>06_02_0074 - 11461300-11461681,11461744-11462009
          Length = 215

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +1

Query: 286 WERAT-KDFLVKVVTTGXFFNDDRGKLTGQAYGTRVLGPGGDSTSYGGRLDWANE 447
           W R T  +   KV T G    D RG+  G+A G    G GGD    G    WA E
Sbjct: 133 WGRRTVTEKAYKVATAGDTEGDKRGEEGGEAGGGDADGAGGDGGGKGE--GWATE 185


>04_03_0671 +
           18549252-18549514,18550286-18550354,18550724-18550862,
           18550993-18551008,18551773-18551821,18552163-18552218,
           18552680-18552752,18552838-18552922,18553098-18553130,
           18553400-18553481,18553525-18553610,18554050-18554058,
           18554522-18554581
          Length = 339

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +1

Query: 25  FYGNPLRFLDILVSSSETCHNSKCIPRXLLSAALLVCVNAQVSMPPGLRREV 180
           F+G PL F+DI+V    +     C+P  L    +L C +    + P   RE+
Sbjct: 271 FFGTPLLFMDIMVIDDCSRFRIGCLPGNL----ILTCFSQGAFVDPRKHREI 318


>08_01_1027 - 10373760-10373837,10373918-10374201,10374286-10374394
          Length = 156

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 527 ILVRILTCQLAEWSLRSSVTEGLMSVYRPRLLTSGNCQ 640
           I+ RIL  +  EW L S V   +M    P L  SGN +
Sbjct: 82  IMERILREEAEEWELESEVRREIMEHIFPLLRRSGNAR 119


>03_02_0631 +
           9969841-9969868,9969965-9970082,9970186-9970828,
           9971146-9971935,9972002-9972051,9972618-9972704
          Length = 571

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -2

Query: 374 ACPVSLPRSSLKNXPVVTTFTKKSLVALSQSPEDLPSP 261
           AC  S+ R SLK  PVV+  +++ L   S SP D  SP
Sbjct: 414 ACRSSIDRLSLKGSPVVSGLSQRQL--SSDSPLDKLSP 449


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,679,572
Number of Sequences: 37544
Number of extensions: 427318
Number of successful extensions: 1095
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)