Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_P21
(899 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 223 3e-59
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 121 2e-28
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 119 5e-28
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 105 6e-24
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 71 2e-13
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 64 2e-11
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 61 2e-10
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 60 3e-10
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 43 5e-05
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.13
SPAC29A4.20 |||RNA polymerase II elongator complex, histone acet... 27 2.7
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 27 3.6
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 6.3
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 26 8.4
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 223 bits (545), Expect = 3e-59
Identities = 102/113 (90%), Positives = 105/113 (92%)
Frame = +1
Query: 277 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 456
P +MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 97
Query: 457 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 615
PEEHP LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTG
Sbjct: 98 PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTG 150
Score = 158 bits (383), Expect = 1e-39
Identities = 77/95 (81%), Positives = 84/95 (88%), Gaps = 1/95 (1%)
Frame = +2
Query: 617 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 796
IVLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVR
Sbjct: 151 IVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVR 210
Query: 797 DIKEKLCYVALDFEQEMAXXA-SAAPXXVXXLPDG 898
DIKEKLCYVALDFEQE+ A S++ LPDG
Sbjct: 211 DIKEKLCYVALDFEQELQTAAQSSSLEKSYELPDG 245
Score = 70.1 bits (164), Expect = 4e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 167 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 274
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPS G+
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGR 37
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 121 bits (291), Expect = 2e-28
Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Frame = +1
Query: 292 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 468
VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + ++ L PEEH
Sbjct: 47 VMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEH 106
Query: 469 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 615
P+LLTE PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTG
Sbjct: 107 PLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTG 155
Score = 97.5 bits (232), Expect = 2e-21
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Frame = +2
Query: 617 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 796
IVL+ GDG++H+VPIY+G+++P AI + ++ GRD+TDYL L + G+ ++AE+EIVR
Sbjct: 156 IVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVR 215
Query: 797 DIKEKLCYVALDFEQEMAXXASAAP-XXVXXLPD 895
+IKEK CYVA DF E+ P LPD
Sbjct: 216 EIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPD 249
Score = 44.8 bits (101), Expect = 2e-05
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 185 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 274
+ +DNGSG KAGFAGDD P+ +FP+ G+
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGR 41
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 119 bits (287), Expect = 5e-28
Identities = 51/101 (50%), Positives = 76/101 (75%)
Frame = +1
Query: 313 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 492
KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 493 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 615
+NP ANREKM + MFE + +YVAIQAVLSLYA G ++G
Sbjct: 110 MNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSG 150
Score = 97.5 bits (232), Expect = 2e-21
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = +2
Query: 617 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 796
+V+DSGDGV+H VP+YE L H + RLD+AGRD T YL+ +L +GY+F TA+ E VR
Sbjct: 151 VVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVR 210
Query: 797 DIKEKLCYVALDFE 838
++KEKLCYV+ D E
Sbjct: 211 EMKEKLCYVSYDLE 224
Score = 39.1 bits (87), Expect = 8e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 173 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 274
E A +V+DNG+G K G+A D+ PR FPS G+
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR 35
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 105 bits (253), Expect = 6e-24
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +1
Query: 316 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 492
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 493 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 600
LNP NRE +IMFE+FN +Y+A+QAVL+L AS
Sbjct: 133 LNPPENRENTAEIMFESFNCAGLYIAVQAVLALAAS 168
Score = 63.3 bits (147), Expect = 5e-11
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +2
Query: 620 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIV 793
V+DSGDGV+H +P+ EGY + +I + LAGRD+T ++ +L +R S TAER
Sbjct: 183 VVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER--- 239
Query: 794 RDIKEKLCYVALDFEQEMA 850
IKE+ CYV D +E +
Sbjct: 240 --IKEECCYVCPDIVKEFS 256
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 185 LVVDNGSGMCKAGFAGDDAPRAVFPS 262
+++DNG+G K G+AG+DAP VFP+
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPT 33
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 71.3 bits (167), Expect = 2e-13
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +1
Query: 358 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 537
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K + MF
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122
Query: 538 ETFNTPAMYVAIQAVLSLYASGRTT 612
E+ PA Y+A Q + +ASG+ T
Sbjct: 123 ESLRCPATYLAKQETCAAFASGKGT 147
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 170 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 274
+EV+A+V+D GS + GF+G+D P+ V PS G+
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGE 43
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 64.5 bits (150), Expect = 2e-11
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +1
Query: 304 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 480
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 481 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 594
TE NP R MT+++FE +N P++ I + S Y
Sbjct: 121 TEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFY 158
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +2
Query: 617 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 796
IVL+ G+ SH +P+ G + R+ G + YL+K+ + SF
Sbjct: 168 IVLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSFPIKMLPSQAE 227
Query: 797 DIKEKLCYVALDFEQEMA 850
+ C+V+ D+ ++A
Sbjct: 228 LLMHDHCHVSSDYTHDIA 245
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 185 LVVDNGSGMCKAGFAGDDAPRAVF 256
LV+DNGS +AG+ G+ P+ VF
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVF 50
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 61.3 bits (142), Expect = 2e-10
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +1
Query: 277 PAIRXVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 450
P+ V + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 451 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 612
V P E+ +++TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKST 150
Score = 36.3 bits (80), Expect = 0.006
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 170 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRG 271
EE+ +LV+D GS + G+AG+++P + PS G
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 60.5 bits (140), Expect = 3e-10
Identities = 27/77 (35%), Positives = 50/77 (64%)
Frame = +2
Query: 617 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 796
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVN 216
Query: 797 DIKEKLCYVALDFEQEM 847
+IKE +CYV+ +F+++M
Sbjct: 217 EIKESVCYVSQNFKEDM 233
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 43.2 bits (97), Expect = 5e-05
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 373 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 540
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 541 TFNTPAMYVAIQAVLSLYASG 603
P +A + ++ LYA G
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIG 192
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +1
Query: 433 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 576
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC29A4.20 |||RNA polymerase II elongator complex, histone
acetyltransferase subunit |Schizosaccharomyces pombe|chr
1|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +1
Query: 538 ETFNTPAMYVAIQAVLSLYASGRTTGYRAGLRRRCLPHRAHLRRIRTPPRHPASGLS--- 708
+ N A+ + I L S R T A + + +R++R P ASG++
Sbjct: 29 KVINLNALKMRISKKHQLSESPRLTDIIAAIPPDAYLKESLMRKLRAKPVRTASGIAVVA 88
Query: 709 -RSRPHRLPH 735
+PHR PH
Sbjct: 89 VMCKPHRCPH 98
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +2
Query: 620 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 766
V+D G + + EG +P++ ++++ G D+T MK+L + +
Sbjct: 295 VVDMGAQKTSISCVEEGVVVPNSRIKINYGGDDITLLFMKLLMRSHFPY 343
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 475 LLTEAPLNPKANREKMTQIMFETFN 549
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 72 RPKLTSWNQNLKEFP 28
RP TSW +N +EFP
Sbjct: 129 RPHWTSWTENSEEFP 143
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,548,803
Number of Sequences: 5004
Number of extensions: 74065
Number of successful extensions: 245
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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