Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_P19
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    26   0.40 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.6  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   2.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.8  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   4.9  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   8.6  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -2

Query: 588 QREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 451
           Q   +  T+     P + + H  +A QQH +    H +  Q+Q +Q
Sbjct: 167 QMHHQMHTQHPHMQPQQGQ-HQSQAQQQHLQAHEQHMMYQQQQQSQ 211


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +2

Query: 59  RDVGRGARNKRRSFLILTRYVKCQHARVSTLAMHHPRPPCLXSTHS 196
           RD+  G    RR+ +I          +V  LAM   R   L STHS
Sbjct: 601 RDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLSSTHS 646


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 307 KNVLQAVQKTNDGHPFKWL 363
           + +L+A +++N   PF+WL
Sbjct: 210 RGILEAARRSNLSQPFQWL 228


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 307 KNVLQAVQKTNDGHPFKWL 363
           + +L+A +++N   PF+WL
Sbjct: 300 RGILEAARRSNLSQPFQWL 318


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 199 LHPEVESLIYWRNAARSGVGP 261
           +HP V S+++W     S + P
Sbjct: 39  IHPTVFSVLFWLGYCNSAINP 59


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 199 LHPEVESLIYWRNAARSGVGP 261
           +HP V S+++W     S + P
Sbjct: 487 IHPTVFSVLFWLGYCNSAINP 507


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 559 ILGWIALFTLPKAYEMNKAQVDANLELAR 645
           I+G I L  +  AY+ ++ +    +ELAR
Sbjct: 834 IIGGIGLIIIEVAYKKHQIRKQKKMELAR 862


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 56  SIKSXKEFPSSGXS 15
           +IKS KEFP+S  S
Sbjct: 97  NIKSQKEFPNSSSS 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,064
Number of Sequences: 438
Number of extensions: 2785
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)