Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_P14
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical pr...    88   9e-18
Z73103-2|CAA97425.2|  400|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical
           protein C24B5.4 protein.
          Length = 284

 Score = 87.8 bits (208), Expect = 9e-18
 Identities = 39/104 (37%), Positives = 62/104 (59%)
 Frame = +1

Query: 196 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIY 375
           V    L +NF+ VEV++ D PDL++PP+  KS G   + ++ E+GGP  L P    D  +
Sbjct: 1   VFQTSLLSNFENVEVNIVDCPDLSKPPFNQKSSGFGHNLRIAEVGGPGNLYPGFHIDHQF 60

Query: 376 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCEGIVNLSVRNGTV 507
           D+ K+ +      A + G GAGPWP +G NCE + +++++ G V
Sbjct: 61  DIPKIGKVCEHPEAAVFGPGAGPWPIVGQNCEMVADVNLKTGEV 104



 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
 Frame = +2

Query: 515 GTRIVSVHPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEG-KPGKVIKVVAKNRTGKS 691
           GTRI  ++          Y+Q+ +  DE + +L+ N  L++  K   V+   A  R G+ 
Sbjct: 105 GTRIAEINS----NSDKRYVQRII--DEPKFSLMANLALSDADKSSTVVHFKASVRKGEK 158

Query: 692 NFITSIRETLKTHYGDKVVGLGGAFVLRAGRGYFHVMPDFSRAPLCSDAAVDSWLHYFEL 871
           N    IR+ L+ H+G K+V L G F+++ G+   HVMPDF   P  ++A VD WL+YFE+
Sbjct: 159 NLTNCIRDGLQEHFGKKIVSLAGQFIIQTGKARLHVMPDFPGCPFENNAEVDKWLNYFEM 218


>Z73103-2|CAA97425.2|  400|Caenorhabditis elegans Hypothetical
           protein C08F8.3 protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 527 VSVHPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKVVAKNRTGKSN 694
           VS  PV AP  S    QQQ P    +TA +GN+L  +   G ++ V   + T + +
Sbjct: 308 VSKAPVVAPS-SQLQQQQQQPCSSNQTARIGNFLERDQVRGNLLGVPLSSSTPRGS 362


>Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical
           protein F21C3.2 protein.
          Length = 813

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 607 SPGLVVGQLLLEVAAAALGRSYWVHRHYSGTLGQQYR 497
           +P + VG  +LE + AA    +W+H  +   L + YR
Sbjct: 403 NPHIYVGGDMLETSTAANDPIFWMHHSFVDLLWEMYR 439


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,690,039
Number of Sequences: 27780
Number of extensions: 448572
Number of successful extensions: 1329
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)