Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_P14
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.91 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   4.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   6.4  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   8.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   8.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   8.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   8.5  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 451 YLGVNCEGIVNLSVRNGT 504
           YLG+ C+G+ ++  RN T
Sbjct: 9   YLGITCQGVTDIHSRNLT 26


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 633 RKGNPER*LKWSRRTARASPTLSRP 707
           +K N E  LK    T  ASPTLS P
Sbjct: 11  KKNNVEN-LKGGGSTTPASPTLSTP 34


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 454 LGVNCEGIVNLSVRNGT 504
           LG+ C+GI +++VR  +
Sbjct: 11  LGIACQGITSVTVRENS 27


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 524 FWYPWSTVPLRTL 486
           FW  W+ VP R +
Sbjct: 322 FWLEWNAVPARVM 334


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 524 FWYPWSTVPLRTL 486
           FW  W+ VP R +
Sbjct: 291 FWLEWNAVPARVM 303


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 524 FWYPWSTVPLRTL 486
           FW  W+ VP R +
Sbjct: 342 FWLEWNAVPARVM 354


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 524 FWYPWSTVPLRTL 486
           FW  W+ VP R +
Sbjct: 291 FWLEWNAVPARVM 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,624
Number of Sequences: 438
Number of extensions: 5657
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)