Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_P12
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 34 0.17
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.67
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 29 3.6
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z19158-3|CAA79572.2| 305|Caenorhabditis elegans Hypothetical pr... 29 4.7
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 29 6.2
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 29 6.2
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 29 6.2
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.2
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 8.2
AL023835-5|CAA19490.1| 471|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 543 PRVWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 686
P V TT S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 423 PDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 470
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 193 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 306
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 247 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 417
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 418 TVKLINKRDHHALKLI 465
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 686
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 555 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGT 692
KTT FT+ P P T ST +S T V + S+T TP T T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTST 480
>Z19158-3|CAA79572.2| 305|Caenorhabditis elegans Hypothetical
protein T23G5.6 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 512 KPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLDNTKGSSD 637
KP +K P +PP N + I S E + LK SSD
Sbjct: 106 KPYQKDPEPMPPICTNGNGFLDINSQEHENNLKRGYESDSSD 147
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 28.7 bits (61), Expect = 6.2
Identities = 28/101 (27%), Positives = 42/101 (41%)
Frame = +1
Query: 151 ATLAPXTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMD 330
A + P ++ IG+ + A S+ LK +GE+ K A K +IE +
Sbjct: 3805 AVVKPVIEETRISNKPQPTKIGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVK 3863
Query: 331 FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHA 453
W KDGKEI KS F T ++ + + HA
Sbjct: 3864 VT---WLKDGKEI-KSTFRTLITTTPTNSSLHIGRLENSHA 3900
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 28.7 bits (61), Expect = 6.2
Identities = 28/101 (27%), Positives = 42/101 (41%)
Frame = +1
Query: 151 ATLAPXTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMD 330
A + P ++ IG+ + A S+ LK +GE+ K A K +IE +
Sbjct: 4043 AVVKPVIEETRISNKPQPTKIGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVK 4101
Query: 331 FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHA 453
W KDGKEI KS F T ++ + + HA
Sbjct: 4102 VT---WLKDGKEI-KSTFRTLITTTPTNSSLHIGRLENSHA 4138
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 28.7 bits (61), Expect = 6.2
Identities = 28/101 (27%), Positives = 42/101 (41%)
Frame = +1
Query: 151 ATLAPXTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMD 330
A + P ++ IG+ + A S+ LK +GE+ K A K +IE +
Sbjct: 4043 AVVKPVIEETRISNKPQPTKIGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVK 4101
Query: 331 FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHA 453
W KDGKEI KS F T ++ + + HA
Sbjct: 4102 VT---WLKDGKEI-KSTFRTLITTTPTNSSLHIGRLENSHA 4138
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 271 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 360
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 187 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 366
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 367 IV--KSYFPIQFRVI 405
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
>AL023835-5|CAA19490.1| 471|Caenorhabditis elegans Hypothetical
protein Y37A1B.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 512 KPARKSPGSLPPCLENNRVYFKIMSTEDKQYLK 610
KP K + PCL ++R+Y + E K YL+
Sbjct: 86 KPTEKRSHLIVPCLNSDRIYIINVENERKIYLE 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,519,995
Number of Sequences: 27780
Number of extensions: 412605
Number of successful extensions: 1479
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1479
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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