Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_P09
         (905 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces...    30   0.39 
SPAC57A10.08c |||esterase/lipase |Schizosaccharomyces pombe|chr ...    29   0.91 
SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual     26   6.4  
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar...    26   8.5  
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom...    26   8.5  

>SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 306

 Score = 30.3 bits (65), Expect = 0.39
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = -3

Query: 789 NDSPKFLSKRLRARFEYAICMLSASFLTFSITQKVNLNLYRVIMFTYACR*GRCSNCIHI 610
           N  P + S+ L+  +E    ++S  FL  + T    ++L  + +FT+  R  R     ++
Sbjct: 180 NPLPSYTSEELKFNWEERRLLISMGFLILAGTDSYGISLPNLGIFTHILRNSRNDLSNYL 239

Query: 609 KLLCYRE 589
           K   YRE
Sbjct: 240 KKRPYRE 246


>SPAC57A10.08c |||esterase/lipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 364

 Score = 29.1 bits (62), Expect = 0.91
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +3

Query: 693 ALSRTLKNSH*AYRLRIQIWRAIASTKIWGYHSIHFNILDIXNXHFSEC 839
           +LS+ +K    A R ++ +W   ++TKIW    +    L     HF +C
Sbjct: 251 SLSKNIKGDGDAVRAQLWLWNRQSNTKIWKTMLMGLEELLEPGFHFPKC 299


>SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 554

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 707 VKKLALSIQIAYSNLARNRFDKNLGLSFNSF 799
           VK   LS+ +AY  L++N  ++ L  S N+F
Sbjct: 459 VKDTLLSLDMAYKALSQNNLNEALSYSNNAF 489


>SPAC13G6.06c |||glycine cleavage complex subunit
            P|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1017

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
 Frame = -3

Query: 414  AHFAALVMSSVRRSEHLTLQSLPGLAPLLHQYRSLIWNNP*SFEPLRFVFVLDVSRL-LS 238
            A+   + ++ +R +    L +   +A  L  +  L++ N  +       F+LD      +
Sbjct: 828  AYMRMMGLAGLRDASKAALLNANYMAKRLSSHYKLVYTNKNNL--CAHEFILDAREFKAT 885

Query: 237  CSTRHTQFLMRFSSKPCFLSSCTRPHLVNVLASEPTQRTTKAKIINFCISIVSFELQVTE 58
                 T    R         + + P + N L  EPT+  +  ++  FC +++S   ++ E
Sbjct: 886  AGVDATDIAKRLQDYSFHAPTLSWP-IANTLMIEPTESESMYEMDRFCDALISIRQEIRE 944


>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 220

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 159 LVNVLASEPTQRTTK-AKIINFCISIVSFEL 70
           L N L++   +  TK AK++NFCI I  F +
Sbjct: 63  LFNSLSARTFRNLTKCAKVVNFCILISLFNV 93


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,122,185
Number of Sequences: 5004
Number of extensions: 59542
Number of successful extensions: 159
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)