Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_P06
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 61 1e-09
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 61 1e-09
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 58 1e-08
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 58 1e-08
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 55 6e-08
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 55 6e-08
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 54 1e-07
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 54 1e-07
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 54 1e-07
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 54 1e-07
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 54 1e-07
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 54 1e-07
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 38 0.008
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 38 0.008
AL110500-3|CAB54483.1| 493|Caenorhabditis elegans Hypothetical ... 30 2.6
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 29 4.6
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 29 4.6
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 29 6.1
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 29 6.1
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 29 6.1
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 29 6.1
AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical ... 28 8.1
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 28 8.1
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +2
Query: 197 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQ 376
LK L +V+ SPL + L L+L +GA +++E+ ++LGG E + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69
Query: 377 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAADIINRWA 550
+ D T + N+++V+ Y + + T L+++ ++++FS + AA +N +
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129
Query: 551 DEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 646
+ T G IK + D + A A + N ++F+
Sbjct: 130 ENHTNGKIKDLIPADSANNAFAF-LVNAMYFK 160
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +2
Query: 197 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQ 376
LK L +V+ SPL + L L+L +GA +++E+ ++LGG E + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69
Query: 377 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAADIINRWA 550
+ D T + N+++V+ Y + + T L+++ ++++FS + AA +N +
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129
Query: 551 DEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 646
+ T G IK + D + A A + N ++F+
Sbjct: 130 ENHTNGKIKDLIPADSANNAFAF-LVNAMYFK 160
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 57.6 bits (133), Expect = 1e-08
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Frame = +2
Query: 188 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQEST--HTY 361
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E H
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 362 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADII 538
+ + VAN I+ + + + + L+ + +NF + +A+ I
Sbjct: 79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAI 138
Query: 539 NRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 646
N + E T+GHIK ++ D I + N +F+
Sbjct: 139 NNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFK 174
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 57.6 bits (133), Expect = 1e-08
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Frame = +2
Query: 188 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQEST--HTY 361
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E H
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 362 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADII 538
+ + VAN I+ + + + + L+ + +NF + +A+ I
Sbjct: 79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAI 138
Query: 539 NRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 646
N + E T+GHIK ++ D I + N +F+
Sbjct: 139 NNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFK 174
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 55.2 bits (127), Expect = 6e-08
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Frame = +2
Query: 224 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAEFDPKF 403
+++++ SPL + L+LSL +G S+++IR L G E + + + K
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 404 LTV--ANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAADIINRWADEQTQGHI 574
+ V ANK+Y+ + + F TA + ++ +++ + P A IN + + T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPA-AVQEINSFVNTATNGKI 139
Query: 575 KTPVSEDKIDPATAVAMFNVIFFQ 646
K ++D I A A+ + N I+F+
Sbjct: 140 KNIATQDSIKDAIAL-LINSIYFK 162
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 55.2 bits (127), Expect = 6e-08
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Frame = +2
Query: 224 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAEFDPKF 403
+++++ SPL + L+LSL +G S+++IR L G E + + + K
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 404 LTV--ANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAADIINRWADEQTQGHI 574
+ V ANK+Y+ + + F TA + ++ +++ + P A IN + + T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPA-AVQEINSFVNTATNGKI 139
Query: 575 KTPVSEDKIDPATAVAMFNVIFFQ 646
K ++D I A A+ + N I+F+
Sbjct: 140 KNIATQDSIKDAIAL-LINSIYFK 162
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Frame = +2
Query: 242 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 415
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 416 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSE 592
N ++ +K+ ++ L+ + +++F + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 593 DKIDPATAVAMFNVIFFQ 646
D I+ + N ++F+
Sbjct: 148 DSINSDLVAVLTNALYFK 165
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Frame = +2
Query: 242 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 415
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 416 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSE 592
N ++ +K+ ++ L+ + +++F + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 593 DKIDPATAVAMFNVIFFQ 646
D I+ + N ++F+
Sbjct: 148 DSINSDLVAVLTNALYFK 165
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Frame = +2
Query: 242 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 415
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 416 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSE 592
N ++ +K+ ++ L+ + +++F + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 593 DKIDPATAVAMFNVIFFQ 646
D I+ + N ++F+
Sbjct: 148 DSINSDLVAVLTNALYFK 165
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Frame = +2
Query: 242 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 415
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 416 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSE 592
N ++ +K+ ++ L+ + +++F + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 593 DKIDPATAVAMFNVIFFQ 646
D I+ + N ++F+
Sbjct: 148 DSINSDLVAVLTNALYFK 165
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Frame = +2
Query: 242 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 415
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 416 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSE 592
N ++ +K+ ++ L+ + +++F + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 593 DKIDPATAVAMFNVIFFQ 646
D I+ + N ++F+
Sbjct: 148 DSINSDLVAVLTNALYFK 165
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Frame = +2
Query: 242 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 415
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 416 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSE 592
N ++ +K+ ++ L+ + +++F + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 593 DKIDPATAVAMFNVIFFQ 646
D I+ + N ++F+
Sbjct: 148 DSINSDLVAVLTNALYFK 165
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 38.3 bits (85), Expect = 0.008
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 5/155 (3%)
Frame = +2
Query: 197 LKESYNLADDKNVIASPLGVMLLL-SLYESGAGAQSKEEIREIL--GGGEAQESTHTYGL 367
LK + ++ + SP+ + L L SLYE+ G +++ +I + L + + TH +
Sbjct: 14 LKLLHQQDHSQSFVFSPIAISLALYSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNV 72
Query: 368 LNQRYA-EFDPKFLTVANKIYVSDQYKLAD-AFSRTANLFRSEVDNINFSAPKNAADIIN 541
A + DP+ + + N I + K + L+ EV + + K IN
Sbjct: 73 STALSAMKKDPQ-VKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTIN 131
Query: 542 RWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 646
+ E T GHIK ++ ID V + F+
Sbjct: 132 KLIRENTDGHIKKINTKISIDKDQVVVFLSAACFE 166
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 38.3 bits (85), Expect = 0.008
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 5/155 (3%)
Frame = +2
Query: 197 LKESYNLADDKNVIASPLGVMLLL-SLYESGAGAQSKEEIREIL--GGGEAQESTHTYGL 367
LK + ++ + SP+ + L L SLYE+ G +++ +I + L + + TH +
Sbjct: 13 LKLLHQQDHSQSFVFSPIAISLALYSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNV 71
Query: 368 LNQRYA-EFDPKFLTVANKIYVSDQYKLAD-AFSRTANLFRSEVDNINFSAPKNAADIIN 541
A + DP+ + + N I + K + L+ EV + + K IN
Sbjct: 72 STALSAMKKDPQ-VKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTIN 130
Query: 542 RWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 646
+ E T GHIK ++ ID V + F+
Sbjct: 131 KLIRENTDGHIKKINTKISIDKDQVVVFLSAACFE 165
>AL110500-3|CAB54483.1| 493|Caenorhabditis elegans Hypothetical
protein Y87G2A.3 protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/100 (19%), Positives = 41/100 (41%)
Frame = +2
Query: 329 GGEAQESTHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINF 508
GG + + G+ + DP + + + Y D+ + T ++ S ++ +
Sbjct: 304 GGRPNHALYFVGMSGSKLFYLDPHYCRPKTES-TAKMYAEKDSTATTDDVGFSHLEEL-V 361
Query: 509 SAPKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMF 628
P AD+ + D + + + +DP+ A+AMF
Sbjct: 362 PLPSQTADVYTKMDDSTYHCQMMLWIEYENVDPSLALAMF 401
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 661 TCQCPLEENDVKHCNGRGGVNFVFADRSLYVSLSLFVRP-TVDDISGILR 515
TCQ P+E +D G++ VF +R LY + F V+D + + R
Sbjct: 353 TCQVPIESSDYLVLLACDGISDVFNERDLYQLVEAFANDYPVEDYAELSR 402
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 661 TCQCPLEENDVKHCNGRGGVNFVFADRSLYVSLSLFVRP-TVDDISGILR 515
TCQ P+E +D G++ VF +R LY + F V+D + + R
Sbjct: 353 TCQVPIESSDYLVLLACDGISDVFNERDLYQLVEAFANDYPVEDYAELSR 402
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
protein F16B12.6 protein.
Length = 1392
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +1
Query: 622 NV*RHFLPGGTGTFPFNASETEEKDFHVDEKTIIKKPTMRLLQSLFY--TENEELGAKMI 795
NV RH + G ET ++H+ E + RL + +FY +N+ G +I
Sbjct: 362 NVRRHPVARLNGELKTVKHETRLAEYHLTEYSARLPREQRLRKKIFYLTRDNQIFGNVLI 421
Query: 796 ELPYKEPXFRMVVVCPTKLTDYLQ 867
Y P + VC D+L+
Sbjct: 422 LYDYVNPGNAPIPVCLPHGNDHLR 445
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -1
Query: 911 VNTSSSRPFRPLFQHCR*SVNFVGQTTTIRNXGSLYGNSIIFAPNSSFSV*NND 750
++T+SS+ F +H N + N GS GN + P SS + NND
Sbjct: 546 LSTNSSQMFTSQDRHSNMPANLFPELQHRLNQGSSTGNGVRPRPASSIGIQNND 599
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -1
Query: 911 VNTSSSRPFRPLFQHCR*SVNFVGQTTTIRNXGSLYGNSIIFAPNSSFSV*NND 750
++T+SS+ F +H N + N GS GN + P SS + NND
Sbjct: 653 LSTNSSQMFTSQDRHSNMPANLFPELQHRLNQGSSTGNGVRPRPASSIGIQNND 706
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 71 TVMDKLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPL 250
T DK LV + FG+ FS RLG+ ++K L+ + N+A KN + + L
Sbjct: 319 TFFDKFYQSNVLVVRRKQPTYFGNLFSTARLGELLEKNHLE-YGRNINIAQYKNGVRTTL 377
>AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical
protein C01B4.9 protein.
Length = 571
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = -3
Query: 621 ATAVAGSILSSLTGVFMCP*VCSSAQRLMISAAFFGALKLMLSTSLLNRFAVLENASANL 442
+T+VAG+++S LTG + +S+ FG + ++ S+L A L + A+
Sbjct: 80 STSVAGAVISILTGCYYLAGPLASS-----FVNVFGIRSVAIAGSILATTAFLLSRFAST 134
Query: 441 YWSETYILLATVKNFG 394
W E Y+L + G
Sbjct: 135 IW-ELYLLFGVLGGIG 149
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = -3
Query: 621 ATAVAGSILSSLTGVFMCP*VCSSAQRLMISAAFFGALKLMLSTSLLNRFAVLENASANL 442
+T+VAG+++S LTG + +S+ FG + ++ S+L A L + A+
Sbjct: 80 STSVAGAVISILTGCYYLAGPLASS-----FVNVFGIRSVAIAGSILATTAFLLSRFAST 134
Query: 441 YWSETYILLATVKNFG 394
W E Y+L + G
Sbjct: 135 IW-ELYLLFGVLGGIG 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,894,062
Number of Sequences: 27780
Number of extensions: 443509
Number of successful extensions: 1185
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -