Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_P04
         (914 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    29   0.70 
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch...    29   0.92 
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2...    28   1.6  
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po...    27   2.8  
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl...    26   8.6  

>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 557

 Score = 29.5 bits (63), Expect = 0.70
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
 Frame = +2

Query: 161 NDRNGYEPIDNRPYIVNPPKD-YNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 325
           N+R  Y+  +++ Y   P +D YN N  N Y PI N  Y+++   G    PYF     PG
Sbjct: 100 NNRTYYK--NSQGYRRKPKRDDYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157


>SPBC21D10.06c |map4||cell agglutination protein
           Map4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 948

 Score = 29.1 bits (62), Expect = 0.92
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +3

Query: 174 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 323
           A+ L +++ T+ + P  +T  ET ++ S+    T T+  +  TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281


>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 244

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
 Frame = +3

Query: 165 TETATNLLTTAR-TSLILPKTTTLMETATNL--STTVHITWTVP 287
           TET+T+ +T+   TS++ P +T+   T T +  +T+++ T TVP
Sbjct: 54  TETSTHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVP 97


>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 658

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +3

Query: 168 ETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 320
           ET T  +    T   + +TTT+      + T +  T T P  + T+ LP++
Sbjct: 105 ETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155



 Score = 25.8 bits (54), Expect = 8.6
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 162 MTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 320
           M ET T L   A T+ +   TTT     T    TV  T T P  +  + LP++
Sbjct: 145 MEETTTILPMAAMTTPMEETTTTTPMVETTTIPTVE-TMTTPMVEAMTILPMA 196


>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
           Plh1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 623

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 218 KDYNPNGNGYEPIDNGAYYVDRPQGRP 298
           K Y  +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,298,155
Number of Sequences: 5004
Number of extensions: 40425
Number of successful extensions: 111
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)