Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_P03
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49254-1|CAA89220.1| 153|Homo sapiens L23-related gene protein. 115 3e-25
U26596-1|AAC50415.1| 153|Homo sapiens ribosomal protein L23-rel... 115 3e-25
BC027710-1|AAH27710.1| 153|Homo sapiens mitochondrial ribosomal... 115 3e-25
BC052988-1|AAH52988.1| 980|Homo sapiens retinoic acid induced 1... 32 3.2
AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein. 32 3.2
AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment e... 32 3.2
AB037755-1|BAA92572.1| 989|Homo sapiens KIAA1334 protein protein. 32 3.2
D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein. 31 4.3
BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc fing... 31 4.3
BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein. 31 4.3
>Z49254-1|CAA89220.1| 153|Homo sapiens L23-related gene protein.
Length = 153
Score = 115 bits (276), Expect = 3e-25
Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +2
Query: 134 YPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVV 313
YP+Y+ G PQLRVF NF+++LVRP Q + V F MEMT+ D++NYLE IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 314 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 490
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
Query: 491 DESKKNFRKY-IDHNKSRPDIPSWFSI 568
+ R+ + R +PSWF +
Sbjct: 127 YSMLEEERQQRQSSDPRRGGVPSWFGL 153
>U26596-1|AAC50415.1| 153|Homo sapiens ribosomal protein
L23-related product protein.
Length = 153
Score = 115 bits (276), Expect = 3e-25
Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +2
Query: 134 YPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVV 313
YP+Y+ G PQLRVF NF+++LVRP Q + V F MEMT+ D++NYLE IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 314 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 490
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
Query: 491 DESKKNFRKY-IDHNKSRPDIPSWFSI 568
+ R+ + R +PSWF +
Sbjct: 127 YSMLEEERQQRQSSDPRRGGVPSWFGL 153
>BC027710-1|AAH27710.1| 153|Homo sapiens mitochondrial ribosomal
protein L23 protein.
Length = 153
Score = 115 bits (276), Expect = 3e-25
Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +2
Query: 134 YPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVV 313
YP+Y+ G PQLRVF NF+++LVRP Q + V F MEMT+ D++NYLE IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 314 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 490
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
Query: 491 DESKKNFRKY-IDHNKSRPDIPSWFSI 568
+ R+ + R +PSWF +
Sbjct: 127 YSMLEEERQQRQSSDPRRGGVPSWFGL 153
>BC052988-1|AAH52988.1| 980|Homo sapiens retinoic acid induced 14
protein.
Length = 980
Score = 31.9 bits (69), Expect = 3.2
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Frame = +2
Query: 191 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 346
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 506 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 564
Query: 347 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESK 502
K V+K V + +++K ++ ++ + M + LFEK +EE K D K
Sbjct: 565 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLK 616
>AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein.
Length = 983
Score = 31.9 bits (69), Expect = 3.2
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Frame = +2
Query: 191 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 346
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 509 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 567
Query: 347 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESK 502
K V+K V + +++K ++ ++ + M + LFEK +EE K D K
Sbjct: 568 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLK 619
>AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment
epithelial cell protein protein.
Length = 980
Score = 31.9 bits (69), Expect = 3.2
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Frame = +2
Query: 191 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 346
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 506 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 564
Query: 347 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESK 502
K V+K V + +++K ++ ++ + M + LFEK +EE K D K
Sbjct: 565 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLK 616
>AB037755-1|BAA92572.1| 989|Homo sapiens KIAA1334 protein protein.
Length = 989
Score = 31.9 bits (69), Expect = 3.2
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Frame = +2
Query: 191 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 346
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 515 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 573
Query: 347 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESK 502
K V+K V + +++K ++ ++ + M + LFEK +EE K D K
Sbjct: 574 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLK 625
>D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein.
Length = 1943
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 134 YPIYQRGNPQ---LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEM-TKYDI 274
+P + GNPQ LRV+ N W+K V P Q I H + +M K DI
Sbjct: 713 HPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDI 763
>BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc finger
protein.
Length = 1942
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 134 YPIYQRGNPQ---LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEM-TKYDI 274
+P + GNPQ LRV+ N W+K V P Q I H + +M K DI
Sbjct: 712 HPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDI 762
>BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein.
Length = 1163
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 134 YPIYQRGNPQ---LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEM-TKYDI 274
+P + GNPQ LRV+ N W+K V P Q I H + +M K DI
Sbjct: 713 HPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDI 763
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,981,975
Number of Sequences: 237096
Number of extensions: 1299443
Number of successful extensions: 2226
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2226
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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